RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 EEF2KO00418 725 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 ZBTB24O43167 697 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 FKTNO75072 461 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 PIGNO95427 931 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 SOX6P35712 828 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 PNPLA4P41247 253 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 ETV1P50549 477 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 PLK1P53350 603 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CTBP1Q13363 440 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 LSM12Q3MHD2 195 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 SLC25A52Q3SY17 297 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 AADACL4Q5VUY2 407 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 TMEM214Q6NUQ4 689 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CNSTQ6PJW8 725 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CRYBG2Q8N1P7 616 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 DTX3Q8N9I9 347 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 BHLHE22Q8NFJ8 381 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 KCTD4Q8WVF5 259 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 PPP1R10Q96QC0 940 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 PCDHAC1Q9H158 963 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 C8orf33Q9H7E9 229 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 DCDC2Q9UHG0 476 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CDV3Q9UKY7 258 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 C9JVG2 144 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 DNAJA2O60884 412 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 FGF18O76093 207 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 IL1BP01584 269 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 ITGB1P05556 798 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 POLBP06746 335 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 HNRNPLP14866 589 aaKnown RBP eCLIP11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 PIK3R1P27986 724 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CD68P34810 354 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CSNK2BP67870 215 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CDKL1Q00532 357 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 FLOT2Q14254 428 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 GSTA3Q16772 222 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 ARL13AQ5H913 290 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 PITRM1Q5JRX3 1037 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 PGM2L1Q6PCE3 622 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 ACAD11Q709F0 780 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CADM3Q8N126 398 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 ACTRT2Q8TDY3 377 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 TMIGD2Q96BF3 282 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 LRRC4Q9HBW1 653 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CYP4F12Q9HCS2 524 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 ZDHHC2Q9UIJ5 367 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 ARHGAP26Q9UNA1 814 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 NOX1Q9Y5S8 564 aa11.61□□□□□ -0.55
CDK5RAP3-231ENST00000584063 A0A0G2JPF8 293 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 HNRNPCL3B7ZW38 293 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 G3V2L1 256 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 HNRNPRO43390 633 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CCNT2O60583 730 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 HNRNPCL4P0DMR1 293 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 PTPN1P18031 435 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 PGAM1P18669 254 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 NMBRP28336 390 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 PCP4P48539 62 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 PGFP49763 221 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 NME5P56597 212 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 KCNC4Q03721 635 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 SF3B4Q15427 424 aaKnown RBP eCLIP11.6□□□□□ -0.552e-8■■■■□ 19.3
CDK5RAP3-231ENST00000584063 MAPKAPK3Q16644 382 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 TIGD5Q53EQ6 642 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 FAM91A1Q658Y4 838 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CYP2R1Q6VVX0 501 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 PRR23CQ6ZRP0 262 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 UNC93AQ86WB7 457 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 DSELQ8IZU8 1212 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 LILRA2Q8N149 483 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 ZMIZ2Q8NF64 920 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 SPATA22Q8NHS9 363 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 FAM110BQ8TC76 370 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 NAT14Q8WUY8 206 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CASP10Q92851 521 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 LRRC39Q96DD0 335 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 ZNF419Q96HQ0 510 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 SLC45A3Q96JT2 553 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 TNIP3Q96KP6 325 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 SMOQ99835 787 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 FTHL17Q9BXU8 183 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 RNF208Q9H0X6 261 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CDH19Q9H159 772 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 UNC93B1Q9H1C4 597 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 C1orf21Q9H246 121 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 NEK6Q9HC98 313 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 GPAMQ9HCL2 828 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 SLC38A7Q9NVC3 462 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 ADA2Q9NZK5 511 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 TMCO1Q9UM00 188 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 CLEC4AQ9UMR7 237 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 SNX8Q9Y5X2 465 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 SCN10AQ9Y5Y9 1956 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 SMPD2O60906 423 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 NPR3P17342 541 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 MX2P20592 715 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 IL32P24001 234 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 PTPN3P26045 913 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 GP5P40197 560 aa11.6□□□□□ -0.55
CDK5RAP3-231ENST00000584063 GRIA4P48058 902 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms