RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 C1orf74Q96LT6 269 aa9.41□□□□□ -0.9
SKA2-207ENST00000583380 PPP3R2Q96LZ3 170 aa9.41□□□□□ -0.9
SKA2-207ENST00000583380 CSF3RQ99062 836 aa9.41□□□□□ -0.9
SKA2-207ENST00000583380 RBM4BQ9BQ04 359 aaKnown RBP9.41□□□□□ -0.9
SKA2-207ENST00000583380 USB1Q9BQ65 265 aaKnown RBP9.41□□□□□ -0.9
SKA2-207ENST00000583380 REEP2Q9BRK0 252 aa9.41□□□□□ -0.9
SKA2-207ENST00000583380 MECRQ9BV79 373 aa9.41□□□□□ -0.9
SKA2-207ENST00000583380 RBM4Q9BWF3 364 aaKnown RBP9.41□□□□□ -0.9
SKA2-207ENST00000583380 REXO4Q9GZR2 422 aaKnown RBP9.41□□□□□ -0.9
SKA2-207ENST00000583380 TMEM117Q9H0C3 514 aa9.41□□□□□ -0.9
SKA2-207ENST00000583380 RACGAP1Q9H0H5 632 aa9.41□□□□□ -0.9
SKA2-207ENST00000583380 RIOX1Q9H6W3 641 aa9.41□□□□□ -0.9
SKA2-207ENST00000583380 TRIM45Q9H8W5 580 aaPredicted RBP9.41□□□□□ -0.9
SKA2-207ENST00000583380 RSAD1Q9HA92 442 aa9.41□□□□□ -0.9
SKA2-207ENST00000583380 NTN4Q9HB63 628 aa9.41□□□□□ -0.9
SKA2-207ENST00000583380 XPNPEP1Q9NQW7 623 aa9.41□□□□□ -0.9
SKA2-207ENST00000583380 EHD3Q9NZN3 535 aa9.41□□□□□ -0.9
SKA2-207ENST00000583380 NYAP2Q9P242 653 aa9.41□□□□□ -0.9
SKA2-207ENST00000583380 ABCD2Q9UBJ2 740 aa9.41□□□□□ -0.9
SKA2-207ENST00000583380 PCDHA11Q9Y5I1 949 aa9.41□□□□□ -0.9
SKA2-207ENST00000583380 TNRC6CQ9HCJ0 1690 aaKnown RBP9.41□□□□□ -0.9
SKA2-207ENST00000583380 TMEM2Q9UHN6 1383 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 A0A1B0GTW7 788 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 CCDC195A0A1B0GUA6 201 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 FAM92AA1XBS5 289 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 MEIOCA2RUB1 952 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 POTEMA6NI47 508 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 F8W036 122 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 WRBO00258 174 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 TBX1O43435 398 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 PRKAB2O43741 272 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 FZD6O60353 706 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 NRP2O60462 931 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 ACSL4O60488 711 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 CYP7B1O75881 506 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 CSPG5O95196 566 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 IL18RAPO95256 599 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 SGPL1O95470 568 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 VNN1O95497 513 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 TDP2O95551 362 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 IFNA4P05014 189 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 BMP3P12645 472 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 ALOX12P18054 663 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 CHRM3P20309 590 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 ACO1P21399 889 aaKnown RBP9.4□□□□□ -0.9
SKA2-207ENST00000583380 ZP3P21754 424 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 PSMA2P25787 234 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 UQCRC1P31930 480 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 CDKN2BP42772 138 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 CTSWP56202 376 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 UBXN2AP68543 259 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 RPP38P78345 283 aaKnown RBP9.4□□□□□ -0.9
SKA2-207ENST00000583380 RELQ04864 619 aaPredicted RBP9.4□□□□□ -0.9
SKA2-207ENST00000583380 SLC13A2Q13183 592 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 AQP6Q13520 282 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 LLGL1Q15334 1064 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 CBWD6Q4V339 395 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 CBWD3Q5JTY5 395 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 CBWD5Q5RIA9 395 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 STEAP4Q687X5 459 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 SDE2Q6IQ49 451 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 HMBOX1Q6NT76 420 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 ZNF720Q7Z2F6 126 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 MAVSQ7Z434 540 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 R3HCC1LQ7Z5L2 792 aaKnown RBP9.4□□□□□ -0.9
SKA2-207ENST00000583380 PTRH1Q86Y79 214 aaKnown RBP9.4□□□□□ -0.9
SKA2-207ENST00000583380 RASAL3Q86YV0 1011 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 FAM178BQ8IXR5 827 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 TAGAPQ8N103 731 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 VWA5B2Q8N398 1253 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 ZSWIM2Q8NEG5 633 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 KAT5Q92993 513 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 PMEPA1Q969W9 287 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 MTERF3Q96E29 417 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 TEKT5Q96M29 485 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 ZNF778Q96MU6 729 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 CPNE1Q99829 537 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 EBNA1BP2Q99848 306 aaKnown RBP9.4□□□□□ -0.9
SKA2-207ENST00000583380 DPYSL5Q9BPU6 564 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 WACQ9BTA9 647 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 TTLL2Q9BWV7 592 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 UGT2B28Q9BY64 529 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 TRIM54Q9BYV2 358 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 SPNS1Q9H2V7 528 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 CLEC4MQ9H2X3 399 aaPredicted RBP9.4□□□□□ -0.9
SKA2-207ENST00000583380 ST6GALNAC4Q9H4F1 302 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 FAM83DQ9H4H8 585 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 LDAHQ9H6V9 325 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 PLEKHA5Q9HAU0 1116 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 TMEM8AQ9HCN3 771 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 RGS18Q9NS28 235 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 PNPOQ9NVS9 261 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 UCKL1Q9NWZ5 548 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 TMOD3Q9NYL9 352 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 IL37Q9NZH6 218 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 GPN3Q9UHW5 284 aaPredicted RBP9.4□□□□□ -0.9
SKA2-207ENST00000583380 KIF25Q9UIL4 384 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 ADAM30Q9UKF2 790 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 USP22Q9UPT9 525 aa9.4□□□□□ -0.9
SKA2-207ENST00000583380 NIP7Q9Y221 180 aaKnown RBP eCLIP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms