RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 C9orf64Q5T6V5 341 aa17.94■□□□□ 0.46
SNX11-212ENST00000583320 FAXCQ5TGI0 409 aa17.94■□□□□ 0.46
SNX11-212ENST00000583320 BROXQ5VW32 411 aa17.94■□□□□ 0.46
SNX11-212ENST00000583320 PDIK1LQ8N165 341 aa17.94■□□□□ 0.46
SNX11-212ENST00000583320 ZNF578Q96N58 590 aaPredicted RBP17.94■□□□□ 0.46
SNX11-212ENST00000583320 RBM15Q96T37 977 aaKnown RBP eCLIP17.94■□□□□ 0.46
SNX11-212ENST00000583320 ERVMER34-1Q9H9K5 563 aa17.94■□□□□ 0.46
SNX11-212ENST00000583320 UBA2Q9UBT2 640 aaPredicted RBP17.94■□□□□ 0.46
SNX11-212ENST00000583320 SEPT3Q9UH03 358 aa17.94■□□□□ 0.46
SNX11-212ENST00000583320 SCML1Q9UN30 329 aa17.94■□□□□ 0.46
SNX11-212ENST00000583320 LRRK2Q5S007 2527 aa17.94■□□□□ 0.46
SNX11-212ENST00000583320 TCRBV7S3A2A0A539 114 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 AP3B1O00203 1094 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 ALOX15BO15296 676 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 KLK10O43240 276 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 AP2A1O95782 977 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 MZF1P28698 734 aaPredicted RBP17.93■□□□□ 0.46
SNX11-212ENST00000583320 SLC8A1P32418 973 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 CTSOP43234 321 aaPredicted RBP17.93■□□□□ 0.46
SNX11-212ENST00000583320 PSMD8P48556 350 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 LMAN1P49257 510 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 METAP1P53582 386 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 PMS2P54278 862 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 GEMP55040 296 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 UCNP55089 124 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 SLC20A2Q08357 652 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 SLC14A2Q15849 920 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 CDCP2Q5VXM1 449 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 KIAA1614Q5VZ46 1190 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 ALS2CLQ60I27 953 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 KCTD11Q693B1 232 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 ALG1LQ6GMV1 187 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 TAB3Q8N5C8 712 aaPredicted RBP17.93■□□□□ 0.46
SNX11-212ENST00000583320 KCNE4Q8WWG9 221 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 LRRC39Q96DD0 335 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 GDAP1L1Q96MZ0 367 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 TTC25Q96NG3 672 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 FAM129BQ96TA1 746 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 OMDQ99983 421 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 C2orf49Q9BVC5 232 aaPredicted RBP17.93■□□□□ 0.46
SNX11-212ENST00000583320 TRIM4Q9C037 500 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 ASCL3Q9NQ33 180 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 VPS28Q9UK41 221 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 FZD4Q9ULV1 537 aa17.93■□□□□ 0.46
SNX11-212ENST00000583320 COL27A1Q8IZC6 1860 aaPredicted RBP17.92■□□□□ 0.46
SNX11-212ENST00000583320 UNC79Q9P2D8 2635 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 TTC34A8MYJ7 566 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 LATO43561 262 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 DXOO77932 396 aaKnown RBP17.92■□□□□ 0.46
SNX11-212ENST00000583320 TSHRP16473 764 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 CES1P23141 567 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 MAGEA3P43357 314 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 ARF5P84085 180 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 VAC14Q08AM6 782 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 ZNF235Q14590 738 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 DNAJC21Q5F1R6 531 aaKnown RBP17.92■□□□□ 0.46
SNX11-212ENST00000583320 CFAP58Q5T655 872 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 NAPEPLDQ6IQ20 393 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 RETSATQ6NUM9 610 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 LRRC8BQ6P9F7 803 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 LINC00523Q86TU6 105 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 CCDC25Q86WR0 208 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 SLC25A45Q8N413 288 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 TSEN2Q8NCE0 465 aaKnown RBP17.92■□□□□ 0.46
SNX11-212ENST00000583320 OR14C36Q8NHC7 312 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 SNRNP27Q8WVK2 155 aaKnown RBP17.92■□□□□ 0.46
SNX11-212ENST00000583320 TTC17Q96AE7 1141 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 MED8Q96G25 268 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 PKNOX2Q96KN3 472 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 SERPINB12Q96P63 405 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 PSKH2Q96QS6 385 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 GORASP1Q9BQQ3 440 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 ACBD3Q9H3P7 528 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 LRRC40Q9H9A6 602 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 CA5BQ9Y2D0 317 aa17.92■□□□□ 0.46
SNX11-212ENST00000583320 DOPEY2Q9Y3R5 2298 aa17.91■□□□□ 0.46
SNX11-212ENST00000583320 A0A1W2PNU3 283 aaPredicted RBP17.91■□□□□ 0.46
SNX11-212ENST00000583320 RNASEH1O60930 286 aaKnown RBP17.91■□□□□ 0.46
SNX11-212ENST00000583320 USP12O75317 370 aa17.91■□□□□ 0.46
SNX11-212ENST00000583320 MYF5P13349 255 aa17.91■□□□□ 0.46
SNX11-212ENST00000583320 HSD17B3P37058 310 aa17.91■□□□□ 0.46
SNX11-212ENST00000583320 MAGEA4P43358 317 aa17.91■□□□□ 0.46
SNX11-212ENST00000583320 MPP3Q13368 585 aa17.91■□□□□ 0.46
SNX11-212ENST00000583320 CAND1Q86VP6 1230 aaKnown RBP17.91■□□□□ 0.46
SNX11-212ENST00000583320 IQCKQ8N0W5 287 aa17.91■□□□□ 0.46
SNX11-212ENST00000583320 OXR1Q8N573 874 aa17.91■□□□□ 0.46
SNX11-212ENST00000583320 MFSD2AQ8NA29 543 aa17.91■□□□□ 0.46
SNX11-212ENST00000583320 IMP4Q96G21 291 aaKnown RBP17.91■□□□□ 0.46
SNX11-212ENST00000583320 MGME1Q9BQP7 344 aa17.91■□□□□ 0.46
SNX11-212ENST00000583320 MLPHQ9BV36 600 aaPredicted RBP17.91■□□□□ 0.46
SNX11-212ENST00000583320 POLR1EQ9GZS1 481 aaKnown RBP17.91■□□□□ 0.46
SNX11-212ENST00000583320 SAYSD1Q9NPB0 183 aa17.91■□□□□ 0.46
SNX11-212ENST00000583320 NT5MQ9NPB1 228 aa17.91■□□□□ 0.46
SNX11-212ENST00000583320 UCKL1Q9NWZ5 548 aa17.91■□□□□ 0.46
SNX11-212ENST00000583320 SSUH2Q9Y2M2 353 aa17.91■□□□□ 0.46
SNX11-212ENST00000583320 GOLGA8MH3BSY2 632 aa17.9■□□□□ 0.46
SNX11-212ENST00000583320 OPA1O60313 960 aa17.9■□□□□ 0.46
SNX11-212ENST00000583320 TTC4O95801 387 aa17.9■□□□□ 0.46
SNX11-212ENST00000583320 MAT2AP31153 395 aaKnown RBP17.9■□□□□ 0.46
SNX11-212ENST00000583320 E2F1Q01094 437 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms