RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 TBATAQ96M53 351 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 C19orf43Q9BQ61 176 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 SLC17A9Q9BYT1 436 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 ABCG8Q9H221 673 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 CDC42EP4Q9H3Q1 356 aaKnown RBP9.51□□□□□ -0.89
RFFL-210ENST00000582308 C6orf106Q9H6K1 298 aaPredicted RBP9.51□□□□□ -0.89
RFFL-210ENST00000582308 IL26Q9NPH9 171 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 PKD2L2Q9NZM6 624 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 IL1RAPL1Q9NZN1 696 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 CD84Q9UIB8 345 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 FKBPLQ9UIM3 349 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 FBXO4Q9UKT5 387 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 FAM169AQ9Y6X4 670 aa9.51□□□□□ -0.89
RFFL-210ENST00000582308 TDRD6O60522 2096 aaKnown RBP9.51□□□□□ -0.89
RFFL-210ENST00000582308 TP53BP1Q12888 1972 aaPredicted RBP9.5□□□□□ -0.89
RFFL-210ENST00000582308 CCDC151A5D8V7 595 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 RGSL1A5PLK6 1076 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 OR51F1A6NGY5 319 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 PRR33A8MZF0 331 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 H7C0S8 307 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 SLC31A1O15431 190 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 LATO43561 262 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 RPP40O75818 363 aaKnown RBP9.5□□□□□ -0.89
RFFL-210ENST00000582308 VAPBO95292 243 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 ACSL3O95573 720 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 PAK4O96013 591 aaPredicted RBP9.5□□□□□ -0.89
RFFL-210ENST00000582308 IGHV4-34P06331 123 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 CA5AP35218 305 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 HADHAP40939 763 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 CCR5P51681 352 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 PMS2P54278 862 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 PTPN5P54829 565 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 DCDC1P59894 354 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 PEX6Q13608 980 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 AGERQ15109 404 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 SMAD1Q15797 465 aaKnown RBP9.5□□□□□ -0.89
RFFL-210ENST00000582308 CHRNA6Q15825 494 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 UAP1Q16222 522 aaPredicted RBP9.5□□□□□ -0.89
RFFL-210ENST00000582308 WSCD2Q2TBF2 565 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 HENMT1Q5T8I9 393 aaKnown RBP9.5□□□□□ -0.89
RFFL-210ENST00000582308 ALS2CLQ60I27 953 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 KIAA0895LQ68EN5 471 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 KIAA0930Q6ICG6 404 aaPredicted RBP9.5□□□□□ -0.89
RFFL-210ENST00000582308 TRMT10BQ6PF06 316 aaKnown RBP9.5□□□□□ -0.89
RFFL-210ENST00000582308 CAPN12Q6ZSI9 719 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 C3orf62Q6ZUJ4 267 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 TRMT10CQ7L0Y3 403 aaKnown RBP9.5□□□□□ -0.89
RFFL-210ENST00000582308 ZNF765Q7L2R6 523 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 CYP2U1Q7Z449 544 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 LONP2Q86WA8 852 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 RAVER1Q8IY67 606 aaKnown RBP9.5□□□□□ -0.89
RFFL-210ENST00000582308 PELI3Q8N2H9 469 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 DEFB119Q8N690 84 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.5□□□□□ -0.89
RFFL-210ENST00000582308 CAVIN3Q969G5 261 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 NUS1Q96E22 293 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 PLEKHG4BQ96PX9 1271 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 KLF6Q99612 283 aaPredicted RBP9.5□□□□□ -0.89
RFFL-210ENST00000582308 RIOK2Q9BVS4 552 aaKnown RBP9.5□□□□□ -0.89
RFFL-210ENST00000582308 EPB41L4BQ9H329 900 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 FAM83DQ9H4H8 585 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 EBF2Q9HAK2 575 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 NFKBIL1Q9UBC1 381 aaPredicted RBP9.5□□□□□ -0.89
RFFL-210ENST00000582308 FNDC3AQ9Y2H6 1198 aaKnown RBP9.5□□□□□ -0.89
RFFL-210ENST00000582308 CACNA1HO95180 2353 aa9.5□□□□□ -0.89
RFFL-210ENST00000582308 UQCRHLA0A096LP55 91 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 TCRBV9S1A1TA0A576 114 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 GOLGA8KD6RF30 607 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 GOLGA8TH3BQL2 631 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 K7ESM1 405 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 RAD51BO15315 384 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 GPR39O43194 453 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 RIPK2O43353 540 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 HRO43593 1189 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 UGT1A9O60656 530 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 NDUFS2O75306 463 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 SOD1P00441 154 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 GOT2P00505 430 aaKnown RBP9.49□□□□□ -0.89
RFFL-210ENST00000582308 C1QAP02745 245 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 UQCRHP07919 91 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 GSTA2P09210 222 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 SP9P0CG40 484 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 PRSS56P0CW18 603 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 ERVK-10P10266 1014 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 H2AFXP16104 143 aaPredicted RBP9.49□□□□□ -0.89
RFFL-210ENST00000582308 TSHRP16473 764 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 PAMP19021 973 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 UGT1A6P19224 532 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 UGT1A1P22309 533 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 UGT1A4P22310 534 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 MC4RP32245 332 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 FOXN2P32314 431 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 UGT1A3P35503 534 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 UGT1A5P35504 534 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 SPAM1P38567 509 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 CDKN1CP49918 316 aaPredicted RBP9.49□□□□□ -0.89
RFFL-210ENST00000582308 PRAMEP78395 509 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 DPTQ07507 201 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 SRSF5Q13243 272 aaKnown RBP9.49□□□□□ -0.89
RFFL-210ENST00000582308 SGCGQ13326 291 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms