RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 CSO75390 466 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 EPOP01588 193 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 CETN2P41208 172 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 ERVPABLB-1P60509 514 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 DYNLT1P63172 113 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 CDK18Q07002 472 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 XRCC4Q13426 336 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 CLPPQ16740 277 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 ISXQ2M1V0 245 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 CERCAMQ5T4B2 595 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 PDPK2PQ6A1A2 396 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 PELI3Q8N2H9 469 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 KYQ8NBH2 561 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 FAM46DQ8NEK8 389 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 FGF11Q92914 225 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 COX14Q96I36 57 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 HIC2Q96JB3 615 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 ZNF578Q96N58 590 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 TRIB3Q96RU7 358 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 CCDC3Q9BQI4 270 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 FERMT1Q9BQL6 677 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 TMEM168Q9H0V1 697 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 CAAP1Q9H8G2 361 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 RMI1Q9H9A7 625 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 POLR1BQ9H9Y6 1135 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 CARS2Q9HA77 564 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 GLOD4Q9HC38 313 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 PKD2L2Q9NZM6 624 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 VPS18Q9P253 973 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 GULP1Q9UBP9 304 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 TRHDEQ9UKU6 1024 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 RAXQ9Y2V3 346 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 GPSM3Q9Y4H4 160 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 PCDHGA8Q9Y5G5 932 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 PCDHA3Q9Y5H8 950 aa12.54□□□□□ -0.4
CDK5RAP3-222ENST00000581708 RP1P56715 2156 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 hCG_1818297A0A087WSY0 165 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 C1orf232A0A0U1RR37 186 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 CCDC66A2RUB6 948 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 GPR89AB7ZAQ6 455 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 RRP8O43159 456 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 PJA2O43164 708 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 CLDN7O95471 211 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 SOD1P00441 154 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 CELA2BP08218 269 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 GPR89BP0CG08 455 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 MYF5P13349 255 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 TNNT1P13805 278 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 PTPN3P26045 913 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 CDC25BP30305 580 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 CTNNA1P35221 906 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 PTPN7P35236 360 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 SPINT3P49223 89 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 CLDN6P56747 220 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 DCDC1P59894 354 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 EIF3IQ13347 325 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 SPIDRQ14159 915 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 C14orf28Q4W4Y0 310 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 PERM1Q5SV97 790 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 NPNTQ6UXI9 565 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 BBS12Q6ZW61 710 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 C17orf82Q86X59 251 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 AGAP3Q96P47 875 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 BAG1Q99933 345 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 FAM83DQ9H4H8 585 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 TRABDQ9H4I3 376 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 ZFYVE1Q9HBF4 777 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 SUFUQ9UMX1 484 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 HYOU1Q9Y4L1 999 aa12.53□□□□□ -0.4
CDK5RAP3-222ENST00000581708 GOLGA6CA6NDK9 693 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 GOLGA6BA6NDN3 693 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 SOWAHDA6NJG2 315 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 APOC4-APOC2K7ER74 178 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 NOBOXO60393 691 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 USP12O75317 370 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 NDST3O95803 873 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 APOC2P02655 101 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 GOLGA6DP0CG33 693 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 CTNNA2P26232 953 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 TNNT3P45378 269 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 VAV2P52735 878 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 WASHC5Q12768 1159 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 HLTFQ14527 1009 aaKnown RBP eCLIP12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 NR1D2Q14995 579 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 PTPRRQ15256 657 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 TBC1D25Q3MII6 688 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 HENMT1Q5T8I9 393 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 ZDHHC20Q5W0Z9 365 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 KAZNQ674X7 775 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 KCTD16Q68DU8 428 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 CCDC50Q8IVM0 306 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 DTX3LQ8TDB6 740 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 SCAMP4Q969E2 229 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 CCDC74AQ96AQ1 378 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 TMEM159Q96B96 161 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 GFM1Q96RP9 751 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 ZSCAN5AQ9BUG6 496 aa12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 RIOK2Q9BVS4 552 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-222ENST00000581708 DPEP2Q9H4A9 486 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms