RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 POLD2P49005 469 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 PTK2Q05397 1052 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 FOXM1Q08050 763 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 ELOAQ14241 798 aaKnown RBP7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 MEA1Q16626 185 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 RESP18Q5W5W9 173 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 PNCKQ6P2M8 343 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 LIPIQ6XZB0 460 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 RRAGAQ7L523 313 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 NLRP14Q86W24 1093 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 IQCKQ8N0W5 287 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 PPM1KQ8N3J5 372 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 GUF1Q8N442 669 aaKnown RBP7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 EHBP1Q8NDI1 1231 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 HCAR2Q8TDS4 363 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 ADAMTS17Q8TE56 1095 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 ZNF606Q8WXB4 792 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 NCSTNQ92542 709 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 NT5C3BQ969T7 300 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 KREMEN1Q96MU8 473 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 GDAP1L1Q96MZ0 367 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 NT5C1BQ96P26 610 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 SLC38A3Q99624 504 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 KLC2Q9H0B6 622 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 BRD8Q9H0E9 1235 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 WDR26Q9H7D7 661 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 METTL14Q9HCE5 456 aaKnown RBP7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 PADI1Q9ULC6 663 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 ATP8A1Q9Y2Q0 1164 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 MDC1Q14676 2089 aaKnown RBP7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 ZGRF1Q86YA3 2104 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 MN1Q10571 1320 aaPredicted RBP7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 CFAP69A5D8W1 941 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 C21orf140B9A014 251 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 E2F3O00716 465 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 ZNF185O15231 689 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 SPAG6O75602 509 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 FAM155BO75949 473 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 YEATS4O95619 227 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 IGSF6O95976 241 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 ERBB2P04626 1255 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 ANKRD34CP0C6C1 535 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 EPB41P11171 864 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 FGF5P12034 268 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 XPAP23025 273 aaPredicted RBP7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 ACTR1BP42025 376 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 NOP2P46087 812 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 GFERP55789 205 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 PER3P56645 1201 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 GEMIN4P57678 1058 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 ACTR1AP61163 376 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 RAD51Q06609 339 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 MRPL14Q6P1L8 145 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 FAM199XQ6PEV8 388 aaPredicted RBP7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 HPS6Q86YV9 775 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 CEP57L1Q8IYX8 460 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 SFRP1Q8N474 314 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 ST6GALNAC3Q8NDV1 305 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 PGAP3Q96FM1 320 aaPredicted RBP7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 ELMO2Q96JJ3 720 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 EXOC2Q96KP1 924 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 OR6C1Q96RD1 312 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 TBCBQ99426 244 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 SMAD5Q99717 465 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 TEX101Q9BY14 249 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 KRTAP4-8Q9BYQ9 185 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 SUV39H2Q9H5I1 410 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 COPG2Q9UBF2 871 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 PPARGC1AQ9UBK2 798 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 LHX3Q9UBR4 397 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 DNAI1Q9UI46 699 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 LNPEPQ9UIQ6 1025 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 PCDHA7Q9UN72 937 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 NEU3Q9UQ49 428 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 OSGIN2Q9Y236 505 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 PKDREJQ9NTG1 2253 aa7.63□□□□□ -1.19
SMARCE1-217ENST00000580654 A6NL46 340 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 CETN3O15182 167 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 KDELR3O43731 214 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 PRICKLE3O43900 615 aaPredicted RBP7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 LETM1O95202 739 aaPredicted RBP7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 C9P02748 559 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 IVLP07476 585 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 CCNYL3P0C7X3 344 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 LPOP22079 712 aaPredicted RBP7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 PTPN4P29074 926 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 CLCN1P35523 988 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 MAPK9P45984 424 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 FMO5P49326 533 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 PPM1FP49593 454 aaPredicted RBP7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 SULT1E1P49888 294 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 HDAC4P56524 1084 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 CDK3Q00526 305 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 SLC6A3Q01959 620 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 DEUP1Q05D60 604 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 NFATC2Q13469 925 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 ART3Q13508 389 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 CUL4AQ13619 759 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 CYTH1Q15438 398 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 RAB6CQ53S08 254 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms