RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 RECKO95980 971 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 FUCA1P04066 466 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 CYP1A1P04798 512 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 CYP2A6P11509 494 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 UCHL3P15374 230 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 RFC1P35251 1148 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 GSCP56915 257 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 TPI1P60174 286 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 CDR2Q01850 454 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 VWA3BQ502W6 1294 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 CAPRIN2Q6IMN6 1127 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SCYL2Q6P3W7 929 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 TIPARPQ7Z3E1 657 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 PHLDB2Q86SQ0 1253 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 PELI3Q8N2H9 469 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SFRP1Q8N474 314 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 DTD2Q96FN9 168 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SCARF2Q96GP6 870 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 OR2M4Q96R27 311 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 EIF3CQ99613 913 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 C11orf70Q9BRQ4 267 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 NAA15Q9BXJ9 866 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 KCND3Q9UK17 655 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 FZD10Q9ULW2 581 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 RPS6KL1Q9Y6S9 549 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 ITPR3Q14573 2671 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 GOLGA6CA6NDK9 693 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 GOLGA6BA6NDN3 693 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 TTLL8A6PVC2 850 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 A8MU76 341 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 A8MX80 341 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 F8VZ95 297 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SOCS5O75159 536 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 HEXIM1O94992 359 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 CALB1P05937 261 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 PYGLP06737 847 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 GOLGA6DP0CG33 693 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 VIPR1P32241 457 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 NSFP46459 744 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 RGRP47804 291 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 PAPOLAP51003 745 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SCNN1BP51168 640 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 ZNF143P52747 638 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 EPHA4P54764 986 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 DPTQ07507 201 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 CNGA3Q16281 694 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SNAP47Q5SQN1 464 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 TMCO4Q5TGY1 634 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 RAET1GQ6H3X3 334 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 DPY19L2P1Q6NXN4 242 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 WDR59Q6PJI9 974 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 AVL9Q8NBF6 648 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 C3orf20Q8ND61 904 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SEC14L1Q92503 715 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 PSKH2Q96QS6 385 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 TUBGCP2Q9BSJ2 902 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SP110Q9HB58 689 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SARS2Q9NP81 518 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 GOLGA6AQ9NYA3 693 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 NOCTQ9UK39 431 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 ST14Q9Y5Y6 855 aa12.15□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SIGLEC16A6NMB1 481 aa12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PES1O00541 588 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 HTRA2O43464 458 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 DDAH2O95865 285 aa12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 SLC2A4P14672 509 aa12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 HSPA9P38646 679 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ETV3P41162 512 aa12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 HHEXQ03014 270 aa12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PLXDC1Q8IUK5 500 aa12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 CBARPQ8N350 705 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 SLC30A5Q8TAD4 765 aa12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 CPT1CQ8TCG5 803 aa12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 SLC37A2Q8TED4 501 aa12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 NCSTNQ92542 709 aa12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 CNPY3Q9BT09 278 aa12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ULBP3Q9BZM4 244 aa12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 APMAPQ9HDC9 416 aa12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ADAM22Q9P0K1 906 aa12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 KIAA1468Q9P260 1216 aa12.14□□□□□ -0.47
CDK5RAP3-216ENST00000579853 CELSR1Q9NYQ6 3014 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 DAPK3O43293 454 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 CCP110O43303 1012 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 MAP3K6O95382 1288 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 CPP00450 1065 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ANKRD34CP0C6C1 535 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 GNLYP22749 145 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 DLSTP36957 453 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 GPR1P46091 355 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 UQCRFS1P47985 274 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 POLD2P49005 469 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PMS2P54278 862 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 FMO1Q01740 532 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 IL10RBQ08334 325 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ERV3-1Q14264 604 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PYCR3Q53H96 274 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ATP1A1-AS1Q5TC04 95 aa12.13□□□□□ -0.47
CDK5RAP3-216ENST00000579853 DENND2CQ68D51 928 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms