RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 HDDC3Q8N4P3 179 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 DNAAF3Q8N9W5 541 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 LPCAT1Q8NF37 534 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 MDGA1Q8NFP4 955 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TSTD1Q8NFU3 115 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PDCD6IPQ8WUM4 868 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ASB12Q8WXK4 309 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 IFT81Q8WYA0 676 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 EID2BQ96D98 161 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 FMO2Q99518 471 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 EBNA1BP2Q99848 306 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 FUT8Q9BYC5 575 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SGK2Q9HBY8 427 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PCDH12Q9NPG4 1184 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 DYRK4Q9NR20 520 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 FBXL12Q9NXK8 326 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 KCTD5Q9NXV2 234 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 IL17CQ9P0M4 197 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 NFKBIL1Q9UBC1 381 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 NFU1Q9UMS0 254 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SOX13Q9UN79 622 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 NCKAP1Q9Y2A7 1128 aa11.14□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PLXNB3Q9ULL4 1909 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 NPIPB15A6NHN6 443 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CRTAMO95727 393 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TTC4O95801 387 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 NTRK1P04629 796 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 GSTA2P09210 222 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 MYBL2P10244 700 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 VIPR1P32241 457 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ABL2P42684 1182 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PSMD8P48556 350 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 DHX9Q08211 1270 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 RALGDSQ12967 914 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 NAA30Q147X3 362 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SLMAPQ14BN4 828 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ZNF423Q2M1K9 1284 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CCDC38Q502W7 563 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SPDYCQ5MJ68 293 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SYCP2LQ5T4T6 812 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CFAP58Q5T655 872 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ERAP2Q6P179 960 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ZNF449Q6P9G9 518 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 EMBQ6PCB8 327 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 LIPIQ6XZB0 460 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CYP2U1Q7Z449 544 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 KDELC2Q7Z4H8 507 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SLC25A41Q8N5S1 370 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 STYXQ8WUJ0 223 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 OMDQ99983 421 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 APOL2Q9BQE5 337 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 WDR83Q9BRX9 315 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CDH19Q9H159 772 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PCED1AQ9H1Q7 454 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ZFYVE1Q9HBF4 777 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PREBQ9HCU5 417 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TREX1Q9NSU2 369 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 POLR3BQ9NW08 1133 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SERGEFQ9UGK8 458 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SPO11Q9Y5K1 396 aa11.13□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SPAARA0A1B0GVQ0 90 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 A0A1W2PP55 124 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CCDC151A5D8V7 595 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 C2orf81A6NN90 581 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 AGAP14A8MT82 685 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 GOLGA8MH3BSY2 632 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 KHNYNO15037 678 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 USP1O94782 785 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 RHOBTB1O94844 696 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ALPIP09923 528 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ACADMP11310 421 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TPH1P17752 444 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 LPOP22079 712 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 LHCGRP22888 699 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 MGAT1P26572 445 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 STC1P52823 247 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 HLTFQ14527 1009 aaKnown RBP eCLIP11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 BRD3Q15059 726 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SKIDA1Q1XH10 827 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TSTD2Q5T7W7 516 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ZDHHC20Q5W0Z9 365 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 STEAP4Q687X5 459 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TECPR1Q7Z6L1 1165 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 NRSN1Q8IZ57 195 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 MDM1Q8TC05 714 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 AENQ8WTP8 325 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CAVIN3Q969G5 261 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CRELD1Q96HD1 420 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 COQ10AQ96MF6 247 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PWWP2AQ96N64 755 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PLAC1Q9HBJ0 212 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CHRAC1Q9NRG0 131 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 NLE1Q9NVX2 485 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 WSB2Q9NYS7 404 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 MOCS1Q9NZB8 636 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 B4GALT6Q9UBX8 382 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.12□□□□□ -0.632e-6■□□□□ 10.2
CDK5RAP3-204ENST00000577664 ZNF711Q9Y462 761 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms