RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 MYH3P11055 1940 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 TMEM233B4DJY2 109 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 RNASEH2AO75792 299 aaKnown RBP13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 PIRTP0C851 137 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 HOXB6P17509 224 aaKnown RBP13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 MED22Q15528 200 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 HDDC2Q7Z4H3 204 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 CAND1Q86VP6 1230 aaKnown RBP13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 PTCD2Q8WV60 388 aaKnown RBP13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 NDRG1Q92597 394 aaKnown RBP13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 FEM1AQ9BSK4 669 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 DUSP16Q9BY84 665 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 SERHL2Q9H4I8 314 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 SERHLQ9NQF3 203 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 LMCD1Q9NZU5 365 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 PCDHB8Q9UN66 801 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 POLR3HQ9Y535 204 aaPredicted RBP13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 PIP5K1BO14986 540 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 TSPAN9O75954 239 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 IL1BP01584 269 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 RHOCP08134 193 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 ARF4P18085 180 aaPredicted RBP13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 PIK3CGP48736 1102 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 CLCN2P51788 898 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 SLC16A1P53985 500 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 OLR1P78380 273 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 DAG1Q14118 895 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 TRPV3Q8NET8 790 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 GPRC5AQ8NFJ5 357 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 SPATA22Q8NHS9 363 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 SMAD5Q99717 465 aaKnown RBP13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 MFHAS1Q9Y4C4 1052 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 LRRC37A3O60309 1634 aa13.1□□□□□ -0.31
PCDHGB3-201ENST00000576222 RGPD1P0DJD0 1748 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 FBP2O00757 339 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 MAGEB3O15480 346 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 AIREO43918 545 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 LRIG2O94898 1065 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 COX10Q12887 443 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 CRY2Q49AN0 593 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 ZCCHC8Q6NZY4 707 aaKnown RBP13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 AHSA2Q719I0 299 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 SH3BP5LQ7L8J4 393 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 BIRC8Q96P09 236 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 SYT11Q9BT88 431 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 MKS1Q9NXB0 559 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 ERGIC3Q9Y282 383 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 GSTK1Q9Y2Q3 226 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 UBR1Q8IWV7 1749 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 ELOVL7A1L3X0 281 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 H3BNH8 94 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 DLX3O60479 287 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 OTCP00480 354 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 UGT2B4P06133 528 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 COX7A2P14406 83 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 PORP16435 677 aaPredicted RBP13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 CELF3Q5SZQ8 465 aaKnown RBP13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 C1orf220Q5T0J3 134 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 OVOS1Q6IE37 1185 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 SEMA3CQ99985 751 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 CLN6Q9NWW5 311 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 TLL2Q9Y6L7 1015 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 MED1Q15648 1581 aaPredicted RBP13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 ATRNL1Q5VV63 1379 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 SLC22A1O15245 554 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 F7P08709 466 aaPredicted RBP13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 RHOAP61586 193 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 GPR180Q86V85 440 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 SUN5Q8TC36 379 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 ABCC13Q9NSE7 274 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 UBA2Q9UBT2 640 aaPredicted RBP13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 TCAF1Q9Y4C2 921 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 PSAT1Q9Y617 370 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 ZNF541Q9H0D2 1346 aa13.09□□□□□ -0.31
PCDHGB3-201ENST00000576222 PSMD11O00231 422 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 AGRPO00253 132 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 ARPC2O15144 300 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 CLIC3O95833 236 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 ACSM2AQ08AH3 577 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 DGKZQ13574 1117 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 ZNF423Q2M1K9 1284 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 PYDC2Q56P42 97 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 TNFAIP8L3Q5GJ75 292 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 RBM48Q5RL73 367 aaKnown RBP13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 ACSM2BQ68CK6 577 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 CHSY3Q70JA7 882 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 PLPPR4Q7Z2D5 763 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 KBTBD6Q86V97 674 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 STK40Q8N2I9 435 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 CAMKK1Q8N5S9 505 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 C18orf25Q96B23 403 aaPredicted RBP13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 TADA1Q96BN2 335 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 VPS35Q96QK1 796 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 PRRG3Q9BZD7 231 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 MROH8Q9H579 483 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 MARCH7Q9H992 704 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 FAIMQ9NVQ4 179 aa13.08□□□□□ -0.31
PCDHGB3-201ENST00000576222 H3BMM5 538 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 UBXN8O00124 270 aa13.08□□□□□ -0.32
PCDHGB3-201ENST00000576222 FOXD2O60548 495 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms