RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 DAPK3O43293 454 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 HEXIM1O94992 359 aaKnown RBP8.96□□□□□ -0.98
SMG6-218ENST00000575454 DDAH2O95865 285 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 FUCA1P04066 466 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 GOLGA6DP0CG33 693 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 CYP2A6P11509 494 aaPredicted RBP8.96□□□□□ -0.98
SMG6-218ENST00000575454 GM2AP17900 193 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 VIPR1P32241 457 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 HSPA9P38646 679 aaKnown RBP8.96□□□□□ -0.98
SMG6-218ENST00000575454 ETV3P41162 512 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 GPR1P46091 355 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 PAPOLAP51003 745 aaKnown RBP8.96□□□□□ -0.98
SMG6-218ENST00000575454 EPHA4P54764 986 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 TPI1P60174 286 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 IL10RBQ08334 325 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 CNGA3Q16281 694 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 SNAP47Q5SQN1 464 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 CAPRIN2Q6IMN6 1127 aaKnown RBP8.96□□□□□ -0.98
SMG6-218ENST00000575454 DPY19L2P1Q6NXN4 242 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 WDR59Q6PJI9 974 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 C6orf15Q6UXA7 325 aaPredicted RBP8.96□□□□□ -0.98
SMG6-218ENST00000575454 ADAMTSL4Q6UY14 1074 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 LYSMD3Q7Z3D4 306 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 TIPARPQ7Z3E1 657 aaKnown RBP8.96□□□□□ -0.98
SMG6-218ENST00000575454 PHLDB2Q86SQ0 1253 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 NLRP8Q86W28 1048 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 GALNT13Q8IUC8 556 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 PLXDC1Q8IUK5 500 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 NDUFAF2Q8N183 169 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 CBARPQ8N350 705 aaPredicted RBP8.96□□□□□ -0.98
SMG6-218ENST00000575454 MLKLQ8NB16 471 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 C3orf20Q8ND61 904 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 PATE1Q8WXA2 126 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 SEC14L1Q92503 715 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 NCSTNQ92542 709 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 ZNF599Q96NL3 588 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 TUBGCP2Q9BSJ2 902 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 CNPY3Q9BT09 278 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 SARS2Q9NP81 518 aaKnown RBP8.96□□□□□ -0.98
SMG6-218ENST00000575454 GOLGA6AQ9NYA3 693 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 TMEM9Q9P0T7 183 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 KIAA1468Q9P260 1216 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 PHTF1Q9UMS5 762 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 TRPM6Q9BX84 2022 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 COL27A1Q8IZC6 1860 aaPredicted RBP8.96□□□□□ -0.98
SMG6-218ENST00000575454 RP1P56715 2156 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 OR5K4A6NMS3 321 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 TOX3O15405 576 aaPredicted RBP8.95□□□□□ -0.98
SMG6-218ENST00000575454 HTRA2O43464 458 aaPredicted RBP8.95□□□□□ -0.98
SMG6-218ENST00000575454 DLGAP3O95886 979 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 ANKRD34CP0C6C1 535 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 CCNYL3P0C7X3 344 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 VARSP26640 1264 aaKnown RBP8.95□□□□□ -0.98
SMG6-218ENST00000575454 DLSTP36957 453 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 RGRP47804 291 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 POLD2P49005 469 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 ZNF135P52742 658 aaPredicted RBP8.95□□□□□ -0.98
SMG6-218ENST00000575454 PMS2P54278 862 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 HHEXQ03014 270 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 IL11RAQ14626 422 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 PYCR3Q53H96 274 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 RALGPS1Q5JS13 557 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.95□□□□□ -0.98
SMG6-218ENST00000575454 DENND2CQ68D51 928 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 CYB5D1Q6P9G0 228 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 DOK6Q6PKX4 331 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 USP45Q70EL2 814 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 SLC9B2Q86UD5 537 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 PELI3Q8N2H9 469 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 BBS5Q8N3I7 341 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 SLC30A5Q8TAD4 765 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 CPT1CQ8TCG5 803 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 SLC37A2Q8TED4 501 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 SCRN2Q96FV2 425 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 CELF6Q96J87 481 aaKnown RBP8.95□□□□□ -0.98
SMG6-218ENST00000575454 HERPUD2Q9BSE4 406 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 ULBP3Q9BZM4 244 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 SLC39A8Q9C0K1 460 aa8.95□□□□□ -0.98
SMG6-218ENST00000575454 NOCTQ9UK39 431 aaKnown RBP8.95□□□□□ -0.98
SMG6-218ENST00000575454 PRRC2CQ9Y520 2896 aaKnown RBP8.94□□□□□ -0.98
SMG6-218ENST00000575454 DFFAO00273 331 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 EEF2KO00418 725 aaKnown RBP8.94□□□□□ -0.98
SMG6-218ENST00000575454 CCP110O43303 1012 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 GFPT2O94808 682 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 MAP3K6O95382 1288 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 CPP00450 1065 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 MT-ND3P03897 115 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 UNGP13051 313 aaPredicted RBP8.94□□□□□ -0.98
SMG6-218ENST00000575454 GNLYP22749 145 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 FMO1Q01740 532 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 NFATC2Q13469 925 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 ERV3-1Q14264 604 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 ZNF235Q14590 738 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 LBRQ14739 615 aaKnown RBP8.94□□□□□ -0.98
SMG6-218ENST00000575454 SYCP1Q15431 976 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 MIIPQ5JXC2 388 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 ATP1A1-AS1Q5TC04 95 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 DNAJC24Q6P3W2 148 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 DCUN1D2Q6PH85 259 aa8.94□□□□□ -0.98
SMG6-218ENST00000575454 IYDQ6PHW0 289 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms