RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 FZD8Q9H461 694 aa14.4□□□□□ -0.1
SMG6-215ENST00000574501 TOR3AQ9H497 397 aa14.4□□□□□ -0.1
SMG6-215ENST00000574501 GSTO2Q9H4Y5 243 aa14.4□□□□□ -0.1
SMG6-215ENST00000574501 NTN4Q9HB63 628 aa14.4□□□□□ -0.1
SMG6-215ENST00000574501 HPS4Q9NQG7 708 aa14.4□□□□□ -0.1
SMG6-215ENST00000574501 EXD2Q9NVH0 621 aa14.4□□□□□ -0.1
SMG6-215ENST00000574501 DPP3Q9NY33 737 aa14.4□□□□□ -0.1
SMG6-215ENST00000574501 EVLQ9UI08 416 aaPredicted RBP14.4□□□□□ -0.1
SMG6-215ENST00000574501 ZNF639Q9UID6 485 aa14.4□□□□□ -0.1
SMG6-215ENST00000574501 SLCO3A1Q9UIG8 710 aa14.4□□□□□ -0.1
SMG6-215ENST00000574501 PDE10AQ9Y233 779 aa14.4□□□□□ -0.1
SMG6-215ENST00000574501 PMF1-BGLAPU3KQ54 211 aa14.4□□□□□ -0.1
SMG6-215ENST00000574501 THRBP10828 461 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 ERCC2P18074 760 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 FSHRP23945 695 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 CDH17Q12864 832 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 PAFAH1B3Q15102 231 aaKnown RBP14.39□□□□□ -0.11
SMG6-215ENST00000574501 CTU2Q2VPK5 515 aaKnown RBP14.39□□□□□ -0.11
SMG6-215ENST00000574501 ADPRMQ3LIE5 342 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 RBM48Q5RL73 367 aaKnown RBP14.39□□□□□ -0.11
SMG6-215ENST00000574501 TAF2Q6P1X5 1199 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 USP43Q70EL4 1123 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 ADCK1Q86TW2 530 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 ZDHHC17Q8IUH5 632 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 KIAA2013Q8IYS2 634 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 LGI2Q8N0V4 545 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 MIER2Q8N344 545 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 GOLM1Q8NBJ4 401 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 C2orf40Q9H1Z8 148 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.39□□□□□ -0.11
SMG6-215ENST00000574501 SLAMF8Q9P0V8 285 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 PPEF2O14830 753 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 DCLK1O15075 740 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 GUCY1B2O75343 617 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 DEAF1O75398 565 aaPredicted RBP14.39□□□□□ -0.11
SMG6-215ENST00000574501 ALDH3A2P51648 485 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 CLCN3P51790 818 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 IST1P53990 364 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 NFYCQ13952 458 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 STXBP2Q15833 593 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 UGP2Q16851 508 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 ZNF789Q5FWF6 425 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 CATSPEREQ5SY80 951 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 C6orf141Q5SZD1 244 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 ANKRD34AQ69YU3 496 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 ZNF470Q6ECI4 717 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 STRADAQ7RTN6 431 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 SAPCD2Q86UD0 394 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 ARMC8Q8IUR7 673 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 NPWQ8N729 165 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 OR6B3Q8NGW1 331 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 SPATA22Q8NHS9 363 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 TMBIM1Q969X1 311 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.39□□□□□ -0.11
SMG6-215ENST00000574501 ZNF486Q96H40 463 aaPredicted RBP14.39□□□□□ -0.11
SMG6-215ENST00000574501 KIFC1Q9BW19 673 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 EPS8L2Q9H6S3 715 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 SMURF2Q9HAU4 748 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 PARVBQ9HBI1 364 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 ABCB10Q9NRK6 738 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 RCOR3Q9P2K3 495 aaPredicted RBP14.39□□□□□ -0.11
SMG6-215ENST00000574501 PCDHGA3Q9Y5H0 932 aa14.39□□□□□ -0.11
SMG6-215ENST00000574501 ZNF646O15015 1829 aaPredicted RBP14.38□□□□□ -0.11
SMG6-215ENST00000574501 NUP205Q92621 2012 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 C16orf96A6NNT2 1141 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 NOBOXO60393 691 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 NDUFS2O75306 463 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 FARP2O94887 1054 aaPredicted RBP14.38□□□□□ -0.11
SMG6-215ENST00000574501 JCHAINP01591 159 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 ALPLP05186 524 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 MAGP20916 626 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 ARNTP27540 789 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 MZF1P28698 734 aaPredicted RBP14.38□□□□□ -0.11
SMG6-215ENST00000574501 SEPHS1P49903 392 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 ATP4BP51164 291 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 RBP5P82980 135 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 RPS6KA2Q15349 733 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 LRIT3Q3SXY7 679 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 KDELC2Q7Z4H8 507 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 CHDHQ8NE62 594 aaPredicted RBP14.38□□□□□ -0.11
SMG6-215ENST00000574501 OSCP1Q8WVF1 389 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 EXT2Q93063 718 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 BTN2A3PQ96KV6 586 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 CXCL16Q9H2A7 254 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 SPC25Q9HBM1 224 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 TIMM22Q9Y584 194 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 SPO11Q9Y5K1 396 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 DNAJC15Q9Y5T4 150 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 SNX5Q9Y5X3 404 aa14.38□□□□□ -0.11
SMG6-215ENST00000574501 A0A087X1B8 175 aa14.37□□□□□ -0.11
SMG6-215ENST00000574501 NUAK1O60285 661 aa14.37□□□□□ -0.11
SMG6-215ENST00000574501 CPB1P15086 417 aa14.37□□□□□ -0.11
SMG6-215ENST00000574501 PIGAP37287 484 aa14.37□□□□□ -0.11
SMG6-215ENST00000574501 MATKP42679 507 aa14.37□□□□□ -0.11
SMG6-215ENST00000574501 KCNC1P48547 511 aa14.37□□□□□ -0.11
SMG6-215ENST00000574501 FOXA1P55317 472 aa14.37□□□□□ -0.11
SMG6-215ENST00000574501 ARPC4P59998 168 aa14.37□□□□□ -0.11
SMG6-215ENST00000574501 MBTD1Q05BQ5 628 aa14.37□□□□□ -0.11
SMG6-215ENST00000574501 DAG1Q14118 895 aa14.37□□□□□ -0.11
SMG6-215ENST00000574501 TMEM132BQ14DG7 1078 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms