RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.44■□□□□ 0.22
TVP23B-206ENST00000574226 CNTD1Q8N815 330 aa16.44■□□□□ 0.22
TVP23B-206ENST00000574226 LPCAT1Q8NF37 534 aa16.44■□□□□ 0.22
TVP23B-206ENST00000574226 IMP4Q96G21 291 aaKnown RBP16.44■□□□□ 0.22
TVP23B-206ENST00000574226 SCARF2Q96GP6 870 aaPredicted RBP16.44■□□□□ 0.22
TVP23B-206ENST00000574226 RBM41Q96IZ5 413 aaKnown RBP16.44■□□□□ 0.22
TVP23B-206ENST00000574226 HIC2Q96JB3 615 aa16.44■□□□□ 0.22
TVP23B-206ENST00000574226 GFM1Q96RP9 751 aaKnown RBP16.44■□□□□ 0.22
TVP23B-206ENST00000574226 SLC25A51Q9H1U9 297 aa16.44■□□□□ 0.22
TVP23B-206ENST00000574226 ABCG8Q9H221 673 aa16.44■□□□□ 0.22
TVP23B-206ENST00000574226 DPEP2Q9H4A9 486 aa16.44■□□□□ 0.22
TVP23B-206ENST00000574226 MRPL40Q9NQ50 206 aaKnown RBP16.44■□□□□ 0.22
TVP23B-206ENST00000574226 PKD2L2Q9NZM6 624 aa16.44■□□□□ 0.22
TVP23B-206ENST00000574226 SIRPGQ9P1W8 387 aa16.44■□□□□ 0.22
TVP23B-206ENST00000574226 PCDHB1Q9Y5F3 818 aa16.44■□□□□ 0.22
TVP23B-206ENST00000574226 C1orf232A0A0U1RR37 186 aa16.43■□□□□ 0.22
TVP23B-206ENST00000574226 MMP2P08253 660 aa16.43■□□□□ 0.22
TVP23B-206ENST00000574226 TNNT1P13805 278 aa16.43■□□□□ 0.22
TVP23B-206ENST00000574226 ABCG1P45844 678 aa16.43■□□□□ 0.22
TVP23B-206ENST00000574226 GABREP78334 506 aa16.43■□□□□ 0.22
TVP23B-206ENST00000574226 SKOR1P84550 965 aa16.43■□□□□ 0.22
TVP23B-206ENST00000574226 ZBTB17Q13105 803 aa16.43■□□□□ 0.22
TVP23B-206ENST00000574226 EIF3IQ13347 325 aaKnown RBP16.43■□□□□ 0.22
TVP23B-206ENST00000574226 LRP8Q14114 963 aa16.43■□□□□ 0.22
TVP23B-206ENST00000574226 C14orf28Q4W4Y0 310 aa16.43■□□□□ 0.22
TVP23B-206ENST00000574226 TEX44Q53QW1 395 aa16.43■□□□□ 0.22
TVP23B-206ENST00000574226 PELI3Q8N2H9 469 aa16.43■□□□□ 0.22
TVP23B-206ENST00000574226 WDR36Q8NI36 951 aaKnown RBP16.43■□□□□ 0.22
TVP23B-206ENST00000574226 TFB1MQ8WVM0 346 aaKnown RBP16.43■□□□□ 0.22
TVP23B-206ENST00000574226 P3H4Q92791 437 aa16.43■□□□□ 0.22
TVP23B-206ENST00000574226 CCDC74AQ96AQ1 378 aa16.43■□□□□ 0.22
TVP23B-206ENST00000574226 TMEM74Q96NL1 305 aa16.43■□□□□ 0.22
TVP23B-206ENST00000574226 VAT1Q99536 393 aa16.43■□□□□ 0.22
TVP23B-206ENST00000574226 THSD1Q9NS62 852 aa16.43■□□□□ 0.22
TVP23B-206ENST00000574226 VPS18Q9P253 973 aa16.43■□□□□ 0.22
TVP23B-206ENST00000574226 PCDHGA8Q9Y5G5 932 aa16.43■□□□□ 0.22
TVP23B-206ENST00000574226 EPN1Q9Y6I3 576 aaPredicted RBP16.43■□□□□ 0.22
TVP23B-206ENST00000574226 CST8O60676 142 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 NDUFA10O95299 355 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 CLDN7O95471 211 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 FECHP22830 423 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 RBMS1P29558 406 aaKnown RBP16.42■□□□□ 0.22
TVP23B-206ENST00000574226 TNNT3P45378 269 aaPredicted RBP16.42■□□□□ 0.22
TVP23B-206ENST00000574226 PCBP4P57723 403 aaKnown RBP16.42■□□□□ 0.22
TVP23B-206ENST00000574226 COPS2P61201 443 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 DYNLT1P63172 113 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 IHHQ14623 411 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 CLPPQ16740 277 aaPredicted RBP16.42■□□□□ 0.22
TVP23B-206ENST00000574226 QPCTQ16769 361 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 SPOCD1Q6ZMY3 1216 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 TXLNBQ8N3L3 684 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 ZNF248Q8NDW4 579 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 SCAMP4Q969E2 229 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 LIN37Q96GY3 246 aaPredicted RBP16.42■□□□□ 0.22
TVP23B-206ENST00000574226 TEKT5Q96M29 485 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 AGAP3Q96P47 875 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 FERMT1Q9BQL6 677 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 STRADBQ9C0K7 418 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 FAM83DQ9H4H8 585 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 MAGEE1Q9HCI5 957 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 SEPT10Q9P0V9 454 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 SUFUQ9UMX1 484 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 EFR3BQ9Y2G0 817 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 ENTPD2Q9Y5L3 495 aa16.42■□□□□ 0.22
TVP23B-206ENST00000574226 CCDC187A0A096LP49 1063 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 BTNL10A8MVZ5 291 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 HACD1B0YJ81 288 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 NOBOXO60393 691 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 ZNF189O75820 626 aaPredicted RBP16.41■□□□□ 0.22
TVP23B-206ENST00000574226 SOD1P00441 154 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 MPOP05164 745 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 GNPDA1P46926 289 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 SPINT3P49223 89 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 CDK18Q07002 472 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 HLTFQ14527 1009 aaKnown RBP eCLIP16.41■□□□□ 0.22
TVP23B-206ENST00000574226 PRKD1Q15139 912 aaPredicted RBP16.41■□□□□ 0.22
TVP23B-206ENST00000574226 PPP2R5EQ16537 467 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 KCTD16Q68DU8 428 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 DAAM2Q86T65 1068 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 CCNJLQ8IV13 435 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 ARL14Q8N4G2 192 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 HNRNPLLQ8WVV9 542 aaKnown RBP16.41■□□□□ 0.22
TVP23B-206ENST00000574226 TMEM159Q96B96 161 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 TADA1Q96BN2 335 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 CCDC97Q96F63 343 aaPredicted RBP16.41■□□□□ 0.22
TVP23B-206ENST00000574226 COX14Q96I36 57 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 DCBLD2Q96PD2 775 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 OR2M4Q96R27 311 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 TRIB3Q96RU7 358 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 RIOK2Q9BVS4 552 aaKnown RBP16.41■□□□□ 0.22
TVP23B-206ENST00000574226 LRRN3Q9H3W5 708 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 RMI1Q9H9A7 625 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 ZFYVE1Q9HBF4 777 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 GLOD4Q9HC38 313 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 LRIT1Q9P2V4 623 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 NFKBIL1Q9UBC1 381 aaPredicted RBP16.41■□□□□ 0.22
TVP23B-206ENST00000574226 CD84Q9UIB8 345 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 HYOU1Q9Y4L1 999 aa16.41■□□□□ 0.22
TVP23B-206ENST00000574226 COL27A1Q8IZC6 1860 aaPredicted RBP16.41■□□□□ 0.22
TVP23B-206ENST00000574226 B4DGG1 531 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms