RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 COQ10AQ96MF6 247 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 CUEDC1Q9NWM3 386 aaPredicted RBP11.89□□□□□ -0.51
CTNS-208ENST00000574218 PDP2Q9P2J9 529 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 KLHL3Q9UH77 587 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 KCND3Q9UK17 655 aa11.89□□□□□ -0.51
CTNS-208ENST00000574218 MRPS18BQ9Y676 258 aaKnown RBP11.89□□□□□ -0.51
CTNS-208ENST00000574218 MED13Q9UHV7 2174 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 CDC14CA4D256 554 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 DAPK3O43293 454 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 MAP3K6O95382 1288 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 CPP00450 1065 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 SLC2A4P14672 509 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 GM2AP17900 193 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 NSFP46459 744 aaKnown RBP11.88□□□□□ -0.51
CTNS-208ENST00000574218 RGRP47804 291 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 POLD2P49005 469 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 PAPOLAP51003 745 aaKnown RBP11.88□□□□□ -0.51
CTNS-208ENST00000574218 HHEXQ03014 270 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 FOXM1Q08050 763 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 NSUN2Q08J23 767 aaKnown RBP eCLIP11.88□□□□□ -0.51
CTNS-208ENST00000574218 NFATC2Q13469 925 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 RFTN1Q14699 578 aaPredicted RBP11.88□□□□□ -0.51
CTNS-208ENST00000574218 SYCP1Q15431 976 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 CNGA3Q16281 694 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 VWA3BQ502W6 1294 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 C6orf15Q6UXA7 325 aaPredicted RBP11.88□□□□□ -0.51
CTNS-208ENST00000574218 TRIM72Q6ZMU5 477 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 ARHGAP22Q7Z5H3 698 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 SLC30A5Q8TAD4 765 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 EPS8L1Q8TE68 723 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 DTD2Q96FN9 168 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 ULBP3Q9BZM4 244 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 SPRY4Q9C004 299 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 NDST4Q9H3R1 872 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 LRRC19Q9H756 370 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 APMAPQ9HDC9 416 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 CROTQ9UKG9 612 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 SLC17A4Q9Y2C5 497 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 OAS3Q9Y6K5 1087 aaKnown RBP11.88□□□□□ -0.51
CTNS-208ENST00000574218 SHANK1Q9Y566 2161 aa11.88□□□□□ -0.51
CTNS-208ENST00000574218 PSMD11O00231 422 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 DFFAO00273 331 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 CCP110O43303 1012 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 HEXIM1O94992 359 aaKnown RBP11.87□□□□□ -0.51
CTNS-208ENST00000574218 ASMTLO95671 621 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 DDAH2O95865 285 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 DLGAP3O95886 979 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 CALB1P05937 261 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 CCNYL3P0C7X3 344 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 TEAD1P28347 426 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 CASP14P31944 242 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 RFC1P35251 1148 aaPredicted RBP11.87□□□□□ -0.51
CTNS-208ENST00000574218 ETV3P41162 512 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 PMS2P54278 862 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 CDR2Q01850 454 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 LRP8Q14114 963 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 ZNF235Q14590 738 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 KLHDC7AQ5VTJ3 777 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 MARK2Q7KZI7 788 aaKnown RBP11.87□□□□□ -0.51
CTNS-208ENST00000574218 PLXDC1Q8IUK5 500 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 RASGRP3Q8IV61 690 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 BBS5Q8N3I7 341 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 STK33Q9BYT3 514 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.87□□□□□ -0.51
CTNS-208ENST00000574218 SLC29A3Q9BZD2 475 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 TWSG1Q9GZX9 223 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 EPB41L1Q9H4G0 881 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 ADAM22Q9P0K1 906 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 CNOT8Q9UFF9 292 aaKnown RBP11.87□□□□□ -0.51
CTNS-208ENST00000574218 TLK1Q9UKI8 766 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 FZD10Q9ULW2 581 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 PLEKHM1Q9Y4G2 1056 aa11.87□□□□□ -0.51
CTNS-208ENST00000574218 PIPSLA2A3N6 862 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 A6NCN8 305 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 F8VZ95 297 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 K7EM74 188 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 EEF2KO00418 725 aaKnown RBP11.86□□□□□ -0.51
CTNS-208ENST00000574218 SOCS5O75159 536 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 FUCA1P04066 466 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 CYP1A1P04798 512 aaPredicted RBP11.86□□□□□ -0.51
CTNS-208ENST00000574218 PYGLP06737 847 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 UCHL3P15374 230 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 EPHA4P54764 986 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 DNAJC24Q6P3W2 148 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 WDR59Q6PJI9 974 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 USP45Q70EL2 814 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 LYSMD3Q7Z3D4 306 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 SLC9B2Q86UD5 537 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 NDUFAF2Q8N183 169 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 SFRP1Q8N474 314 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 AVL9Q8NBF6 648 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 SLC20A1Q8WUM9 679 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 TUBGCP2Q9BSJ2 902 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 SLC39A8Q9C0K1 460 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 SARS2Q9NP81 518 aaKnown RBP11.86□□□□□ -0.51
CTNS-208ENST00000574218 CASS4Q9NQ75 786 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 SEPT11Q9NVA2 429 aaKnown RBP11.86□□□□□ -0.51
CTNS-208ENST00000574218 MAP10Q9P2G4 905 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 PHTF1Q9UMS5 762 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 TMEM98Q9Y2Y6 226 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms