RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 RAB34Q9BZG1 259 aa5.06□□□□□ -1.6
CDC27-215ENST00000573550 TRIM9Q9C026 710 aa5.06□□□□□ -1.6
CDC27-215ENST00000573550 FAM107BQ9H098 131 aa5.06□□□□□ -1.6
CDC27-215ENST00000573550 FAM234AQ9H0X4 552 aa5.06□□□□□ -1.6
CDC27-215ENST00000573550 GLT8D2Q9H1C3 349 aa5.06□□□□□ -1.6
CDC27-215ENST00000573550 TAF1DQ9H5J8 278 aaPredicted RBP5.06□□□□□ -1.6
CDC27-215ENST00000573550 ZNF304Q9HCX3 659 aa5.06□□□□□ -1.6
CDC27-215ENST00000573550 PTPRHQ9HD43 1115 aa5.06□□□□□ -1.6
CDC27-215ENST00000573550 C6orf50Q9HD87 102 aa5.06□□□□□ -1.6
CDC27-215ENST00000573550 TMLHEQ9NVH6 421 aa5.06□□□□□ -1.6
CDC27-215ENST00000573550 ARL15Q9NXU5 204 aa5.06□□□□□ -1.6
CDC27-215ENST00000573550 RNF14Q9UBS8 474 aa5.06□□□□□ -1.6
CDC27-215ENST00000573550 NARFQ9UHQ1 456 aa5.06□□□□□ -1.6
CDC27-215ENST00000573550 MAD2L2Q9UI95 211 aa5.06□□□□□ -1.6
CDC27-215ENST00000573550 BAG5Q9UL15 447 aa5.06□□□□□ -1.6
CDC27-215ENST00000573550 JRKLQ9Y4A0 524 aa5.06□□□□□ -1.6
CDC27-215ENST00000573550 SAR1BQ9Y6B6 198 aa5.06□□□□□ -1.6
CDC27-215ENST00000573550 SQORQ9Y6N5 450 aa5.06□□□□□ -1.6
CDC27-215ENST00000573550 ARFGEF1Q9Y6D6 1849 aa5.06□□□□□ -1.6
CDC27-215ENST00000573550 LOXHD1Q8IVV2 1947 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 UBR3Q6ZT12 1888 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 GAKO14976 1311 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 KDM3AQ9Y4C1 1321 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 MYMKA6NI61 221 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 CD8B2A6NJW9 211 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 SRRM3A6NNA2 597 aaPredicted RBP5.05□□□□□ -1.6
CDC27-215ENST00000573550 H3BQF6 201 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 NPHP1O15259 732 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 SHOX2O60902 331 aaPredicted RBP5.05□□□□□ -1.6
CDC27-215ENST00000573550 PEX14O75381 377 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 FAM155BO75949 473 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 GNA14O95837 355 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 CHN1P15882 459 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 GCFC2P16383 781 aaKnown RBP5.05□□□□□ -1.6
CDC27-215ENST00000573550 HOXB9P17482 250 aaPredicted RBP5.05□□□□□ -1.6
CDC27-215ENST00000573550 TRIM21P19474 475 aaKnown RBP5.05□□□□□ -1.6
CDC27-215ENST00000573550 STAT1P42224 750 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 HSPA2P54652 639 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 STX17P56962 302 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 VSNL1P62760 191 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 DYNLL1P63167 89 aaKnown RBP5.05□□□□□ -1.6
CDC27-215ENST00000573550 GAD2Q05329 585 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 KIF5AQ12840 1032 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 PDIA5Q14554 519 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 SPA17Q15506 151 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 GPR162Q16538 588 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 ASPRV1Q53RT3 343 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 HSP90AA4PQ58FG1 418 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 HYIQ5T013 277 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 CCDC122Q5T0U0 273 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 CENPPQ6IPU0 288 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 MTFR2Q6P444 385 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 EMBQ6PCB8 327 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 WDR59Q6PJI9 974 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 LEKR1Q6ZMV7 388 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 SYT13Q7L8C5 426 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 ANKS1BQ7Z6G8 1248 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 DZIP1Q86YF9 867 aaKnown RBP5.05□□□□□ -1.6
CDC27-215ENST00000573550 GPSM1Q86YR5 675 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 GALNT15Q8N3T1 639 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 MMGT1Q8N4V1 131 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 RNF10Q8N5U6 811 aaKnown RBP5.05□□□□□ -1.6
CDC27-215ENST00000573550 C1orf131Q8NDD1 294 aaKnown RBP5.05□□□□□ -1.6
CDC27-215ENST00000573550 OR6Y1Q8NGX8 325 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 JAKMIP2Q96AA8 810 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 CALML4Q96GE6 196 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 CNOT6LQ96LI5 555 aaKnown RBP5.05□□□□□ -1.6
CDC27-215ENST00000573550 CAMK1GQ96NX5 476 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 ALS2CR12Q96Q35 445 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 ARPC5LQ9BPX5 153 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 TUBGCP2Q9BSJ2 902 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 SH2D4AQ9H788 454 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 MAP6D1Q9H9H5 199 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 Q9N2J8 555 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 RIC8AQ9NPQ8 531 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 TMEM248Q9NWD8 314 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 TAB2Q9NYJ8 693 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 SWAP70Q9UH65 585 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 TTC3P53804 2025 aa5.05□□□□□ -1.6
CDC27-215ENST00000573550 NRXN2Q9P2S2 1712 aa5.04□□□□□ -1.6
CDC27-215ENST00000573550 TCRBV7S3A2A0A539 114 aa5.04□□□□□ -1.6
CDC27-215ENST00000573550 BTNL10A8MVZ5 291 aa5.04□□□□□ -1.6
CDC27-215ENST00000573550 E7EVH7 732 aa5.04□□□□□ -1.6
CDC27-215ENST00000573550 SNAP23O00161 211 aa5.04□□□□□ -1.6
CDC27-215ENST00000573550 MDM4O15151 490 aa5.04□□□□□ -1.6
CDC27-215ENST00000573550 KCNAB3O43448 404 aa5.04□□□□□ -1.6
CDC27-215ENST00000573550 USO1O60763 962 aaKnown RBP5.04□□□□□ -1.6
CDC27-215ENST00000573550 ZC3H11AO75152 810 aaKnown RBP eCLIP5.04□□□□□ -1.6
CDC27-215ENST00000573550 TACC1O75410 805 aa5.04□□□□□ -1.6
CDC27-215ENST00000573550 OAZ2O95190 189 aa5.04□□□□□ -1.6
CDC27-215ENST00000573550 CRYABP02511 175 aaKnown RBP5.04□□□□□ -1.6
CDC27-215ENST00000573550 LCKP06239 509 aa5.04□□□□□ -1.6
CDC27-215ENST00000573550 TSPY3P0CV98 308 aa5.04□□□□□ -1.6
CDC27-215ENST00000573550 TSPY8P0CW00 308 aa5.04□□□□□ -1.6
CDC27-215ENST00000573550 SNHG28P0DPA3 235 aa5.04□□□□□ -1.6
CDC27-215ENST00000573550 EPB41P11171 864 aaKnown RBP5.04□□□□□ -1.6
CDC27-215ENST00000573550 LYL1P12980 280 aa5.04□□□□□ -1.6
CDC27-215ENST00000573550 ACP5P13686 325 aa5.04□□□□□ -1.6
CDC27-215ENST00000573550 PKMP14618 531 aaKnown RBP5.04□□□□□ -1.6
CDC27-215ENST00000573550 HMGB2P26583 209 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms