RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 MRGPRX2Q96LB1 330 aa20.61■□□□□ 0.89
CHMP6-204ENST00000572778 APOLD1Q96LR9 279 aa20.61■□□□□ 0.89
CHMP6-204ENST00000572778 AGAP2Q99490 1192 aa20.61■□□□□ 0.89
CHMP6-204ENST00000572778 GPR63Q9BZJ6 419 aa20.61■□□□□ 0.89
CHMP6-204ENST00000572778 GBA3Q9H227 469 aa20.61■□□□□ 0.89
CHMP6-204ENST00000572778 MAGEE1Q9HCI5 957 aa20.61■□□□□ 0.89
CHMP6-204ENST00000572778 CYP4F12Q9HCS2 524 aa20.61■□□□□ 0.89
CHMP6-204ENST00000572778 LMO7DNF2Z398 122 aa20.6■□□□□ 0.89
CHMP6-204ENST00000572778 TNFRSF10CO14798 259 aa20.6■□□□□ 0.89
CHMP6-204ENST00000572778 RFPL3O75679 317 aa20.6■□□□□ 0.89
CHMP6-204ENST00000572778 MYF5P13349 255 aa20.6■□□□□ 0.89
CHMP6-204ENST00000572778 TEAD1P28347 426 aa20.6■□□□□ 0.89
CHMP6-204ENST00000572778 SPINT3P49223 89 aa20.6■□□□□ 0.89
CHMP6-204ENST00000572778 MPP3Q13368 585 aa20.6■□□□□ 0.89
CHMP6-204ENST00000572778 ZCCHC8Q6NZY4 707 aaKnown RBP20.6■□□□□ 0.89
CHMP6-204ENST00000572778 NLRP8Q86W28 1048 aa20.6■□□□□ 0.89
CHMP6-204ENST00000572778 RAVER1Q8IY67 606 aaKnown RBP20.6■□□□□ 0.89
CHMP6-204ENST00000572778 SUDS3Q9H7L9 328 aaPredicted RBP20.6■□□□□ 0.89
CHMP6-204ENST00000572778 R3HDM2Q9Y2K5 976 aaKnown RBP20.6■□□□□ 0.89
CHMP6-204ENST00000572778 ZNF711Q9Y462 761 aa20.6■□□□□ 0.89
CHMP6-204ENST00000572778 PCDHGA1Q9Y5H4 931 aa20.6■□□□□ 0.89
CHMP6-204ENST00000572778 DGKBQ9Y6T7 804 aa20.6■□□□□ 0.89
CHMP6-204ENST00000572778 LRRK1Q38SD2 2015 aa20.6■□□□□ 0.89
CHMP6-204ENST00000572778 LOC285095A0A1B0GVY8 99 aa20.59■□□□□ 0.89
CHMP6-204ENST00000572778 TPP1O14773 563 aa20.59■□□□□ 0.89
CHMP6-204ENST00000572778 YY2O15391 372 aa20.59■□□□□ 0.89
CHMP6-204ENST00000572778 PYGLP06737 847 aa20.59■□□□□ 0.89
CHMP6-204ENST00000572778 CHRNA4P43681 627 aa20.59■□□□□ 0.89
CHMP6-204ENST00000572778 GEMP55040 296 aa20.59■□□□□ 0.89
CHMP6-204ENST00000572778 PRPSAP1Q14558 356 aa20.59■□□□□ 0.89
CHMP6-204ENST00000572778 SIRPB2Q5JXA9 342 aa20.59■□□□□ 0.89
CHMP6-204ENST00000572778 ADAMTSL4Q6UY14 1074 aa20.59■□□□□ 0.89
CHMP6-204ENST00000572778 FAM181AQ8N9Y4 354 aa20.59■□□□□ 0.89
CHMP6-204ENST00000572778 TRIM58Q8NG06 486 aa20.59■□□□□ 0.89
CHMP6-204ENST00000572778 CCDC110Q8TBZ0 833 aa20.59■□□□□ 0.89
CHMP6-204ENST00000572778 SCG3Q8WXD2 468 aaKnown RBP20.59■□□□□ 0.89
CHMP6-204ENST00000572778 SPATA13Q96N96 652 aa20.59■□□□□ 0.89
CHMP6-204ENST00000572778 FSD1LQ9BXM9 530 aa20.59■□□□□ 0.89
CHMP6-204ENST00000572778 FAM83DQ9H4H8 585 aa20.59■□□□□ 0.89
CHMP6-204ENST00000572778 USP29Q9HBJ7 922 aa20.59■□□□□ 0.89
CHMP6-204ENST00000572778 SPO11Q9Y5K1 396 aa20.59■□□□□ 0.89
CHMP6-204ENST00000572778 COL5A1P20908 1838 aaPredicted RBP20.58■□□□□ 0.89
CHMP6-204ENST00000572778 PRSS38A1L453 326 aa20.58■□□□□ 0.89
CHMP6-204ENST00000572778 RGSL1A5PLK6 1076 aa20.58■□□□□ 0.89
CHMP6-204ENST00000572778 INPP4BO15327 924 aa20.58■□□□□ 0.89
CHMP6-204ENST00000572778 ZNF189O75820 626 aaPredicted RBP20.58■□□□□ 0.89
CHMP6-204ENST00000572778 ANXA9O76027 345 aa20.58■□□□□ 0.89
CHMP6-204ENST00000572778 SOD1P00441 154 aa20.58■□□□□ 0.89
CHMP6-204ENST00000572778 EPOP01588 193 aa20.58■□□□□ 0.89
CHMP6-204ENST00000572778 ACP1P24666 158 aa20.58■□□□□ 0.89
CHMP6-204ENST00000572778 PSMB4P28070 264 aa20.58■□□□□ 0.89
CHMP6-204ENST00000572778 POLD2P49005 469 aa20.58■□□□□ 0.89
CHMP6-204ENST00000572778 DUSP3P51452 185 aaPredicted RBP20.58■□□□□ 0.89
CHMP6-204ENST00000572778 DOK6Q6PKX4 331 aa20.58■□□□□ 0.89
CHMP6-204ENST00000572778 TMC3Q7Z5M5 1100 aa20.58■□□□□ 0.89
CHMP6-204ENST00000572778 GKN2Q86XP6 184 aa20.58■□□□□ 0.89
CHMP6-204ENST00000572778 FAM71DQ8N9W8 422 aa20.58■□□□□ 0.89
CHMP6-204ENST00000572778 EID2BQ96D98 161 aa20.58■□□□□ 0.89
CHMP6-204ENST00000572778 WDR24Q96S15 920 aa20.58■□□□□ 0.89
CHMP6-204ENST00000572778 SRPK1Q96SB4 655 aaKnown RBP20.58■□□□□ 0.89
CHMP6-204ENST00000572778 FRMD8Q9BZ67 464 aaPredicted RBP20.58■□□□□ 0.89
CHMP6-204ENST00000572778 CARS2Q9HA77 564 aaKnown RBP20.58■□□□□ 0.89
CHMP6-204ENST00000572778 EVA1BQ9NVM1 165 aa20.58■□□□□ 0.89
CHMP6-204ENST00000572778 NEUROG3Q9Y4Z2 214 aa20.58■□□□□ 0.89
CHMP6-204ENST00000572778 AGTP01019 485 aa20.57■□□□□ 0.88
CHMP6-204ENST00000572778 CEACAM5P06731 702 aa20.57■□□□□ 0.88
CHMP6-204ENST00000572778 CKMT1AP12532 417 aa20.57■□□□□ 0.88
CHMP6-204ENST00000572778 HLA-DPA1P20036 260 aa20.57■□□□□ 0.88
CHMP6-204ENST00000572778 GNPDA1P46926 289 aa20.57■□□□□ 0.88
CHMP6-204ENST00000572778 SLC1A5Q15758 541 aa20.57■□□□□ 0.88
CHMP6-204ENST00000572778 ALS2CLQ60I27 953 aa20.57■□□□□ 0.88
CHMP6-204ENST00000572778 TAF8Q7Z7C8 310 aa20.57■□□□□ 0.88
CHMP6-204ENST00000572778 TRIM74Q86UV6 250 aa20.57■□□□□ 0.88
CHMP6-204ENST00000572778 SLC13A5Q86YT5 568 aaPredicted RBP20.57■□□□□ 0.88
CHMP6-204ENST00000572778 SLC35B2Q8TB61 432 aa20.57■□□□□ 0.88
CHMP6-204ENST00000572778 GLMNQ92990 594 aa20.57■□□□□ 0.88
CHMP6-204ENST00000572778 HIC2Q96JB3 615 aa20.57■□□□□ 0.88
CHMP6-204ENST00000572778 FICDQ9BVA6 458 aa20.57■□□□□ 0.88
CHMP6-204ENST00000572778 TMEM168Q9H0V1 697 aa20.57■□□□□ 0.88
CHMP6-204ENST00000572778 CARD9Q9H257 536 aa20.57■□□□□ 0.88
CHMP6-204ENST00000572778 TMEM98Q9Y2Y6 226 aa20.57■□□□□ 0.88
CHMP6-204ENST00000572778 AAR2Q9Y312 384 aaKnown RBP20.57■□□□□ 0.88
CHMP6-204ENST00000572778 LY6G6EA0A0G2JKS1 128 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 C5orf60A6NFR6 353 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 AURKAO14965 403 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 ASMTLO95671 621 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 CDK4P11802 303 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 ILKQ13418 452 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 NR0B2Q15466 257 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 C6orf132Q5T0Z8 1188 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 HENMT1Q5T8I9 393 aaKnown RBP20.56■□□□□ 0.88
CHMP6-204ENST00000572778 LVRNQ6Q4G3 990 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 ARHGEF18Q6ZSZ5 1173 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 TMPRSS7Q7RTY8 843 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 SDR16C5Q8N3Y7 309 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 GPR26Q8NDV2 337 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 ATG4AQ8WYN0 398 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 CNTNAP3BQ96NU0 1288 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 GORASP1Q9BQQ3 440 aa20.56■□□□□ 0.88
CHMP6-204ENST00000572778 TMEM121Q9BTD3 319 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms