RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 XPO1O14980 1071 aaKnown RBP6.9□□□□□ -1.3
CHD3-213ENST00000571249 KLF4O43474 513 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 PROM1O43490 865 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 TMEM63AO94886 807 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 CLDN14O95500 239 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 BMP15O95972 392 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 ASS1P00966 412 aaKnown RBP6.9□□□□□ -1.3
CHD3-213ENST00000571249 RPN1P04843 607 aaKnown RBP6.9□□□□□ -1.3
CHD3-213ENST00000571249 PTPN4P29074 926 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 DNA2P51530 1060 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 DAOAP59103 153 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 CEBPZQ03701 1054 aaKnown RBP6.9□□□□□ -1.3
CHD3-213ENST00000571249 FOLH1Q04609 750 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 TYRO3Q06418 890 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 LRRC14Q15048 493 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 KYNUQ16719 465 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 WSCD2Q2TBF2 565 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 LRRC73Q5JTD7 316 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 LYPLAL1Q5VWZ2 237 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 RESP18Q5W5W9 173 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 ARHGAP17Q68EM7 881 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 C22orf39Q6P5X5 142 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 CIARTQ8N365 385 aaPredicted RBP6.9□□□□□ -1.3
CHD3-213ENST00000571249 OR56A4Q8NGH8 313 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 EPS8L3Q8TE67 593 aaKnown RBP6.9□□□□□ -1.3
CHD3-213ENST00000571249 CXorf40AQ8TE69 158 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 DQX1Q8TE96 717 aaKnown RBP6.9□□□□□ -1.3
CHD3-213ENST00000571249 CPLX3Q8WVH0 158 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 TMEM158Q8WZ71 300 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 ANP32BQ92688 251 aaKnown RBP6.9□□□□□ -1.3
CHD3-213ENST00000571249 AHCYL2Q96HN2 611 aaKnown RBP6.9□□□□□ -1.3
CHD3-213ENST00000571249 SERPINB11Q96P15 392 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 NT5C1BQ96P26 610 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 SLX1AQ9BQ83 275 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 RSRP1Q9BUV0 290 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 SLC6A16Q9GZN6 736 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 MUC3BQ9H195 1237 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 ZNF395Q9H8N7 513 aaPredicted RBP6.9□□□□□ -1.3
CHD3-213ENST00000571249 CYP3A43Q9HB55 503 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 FGF22Q9HCT0 170 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 LHX9Q9NQ69 397 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 PANK4Q9NVE7 773 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 FANCLQ9NW38 375 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 C5AR2Q9P296 337 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 VPS51Q9UID3 782 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 LNPEPQ9UIQ6 1025 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 ST6GALNAC2Q9UJ37 374 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 ZNF232Q9UNY5 417 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 BTRCQ9Y297 605 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 TLR6Q9Y2C9 796 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 EFR3BQ9Y2G0 817 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 PLEKHM1Q9Y4G2 1056 aa6.9□□□□□ -1.3
CHD3-213ENST00000571249 INTS1Q8N201 2190 aaKnown RBP6.9□□□□□ -1.3
CHD3-213ENST00000571249 A0A0U1RQS6 177 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 MASP2O00187 686 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 PIK3R2O00459 728 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 TGFB1I1O43294 461 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 ZNF821O75541 412 aaPredicted RBP6.89□□□□□ -1.31
CHD3-213ENST00000571249 NDUFA10O95299 355 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 APOEP02649 317 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 ITIH2P19823 946 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 GKP32189 559 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 GARSP41250 739 aaKnown RBP6.89□□□□□ -1.31
CHD3-213ENST00000571249 SH3BP2P78314 561 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 GPLD1P80108 840 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 PPP2R2BQ00005 443 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 AMPD3Q01432 767 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 GOLGA7BQ2TAP0 167 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 ZC3H12AQ5D1E8 599 aaKnown RBP6.89□□□□□ -1.31
CHD3-213ENST00000571249 CARD16Q5EG05 197 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 EFHC1Q5JVL4 640 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 RABGAP1LQ5R372 815 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 VWA5B1Q5TIE3 1220 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 HMBOX1Q6NT76 420 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 FBXL22Q6P050 247 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 IGFL3Q6UXB1 125 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 NCCRP1Q6ZVX7 275 aaPredicted RBP6.89□□□□□ -1.31
CHD3-213ENST00000571249 STXBP4Q6ZWJ1 553 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 SV2BQ7L1I2 683 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 SYVN1Q86TM6 617 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 NRROSQ86YC3 692 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 TREML1Q86YW5 311 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 RASGRP3Q8IV61 690 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 UBA3Q8TBC4 463 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 ADAMTS17Q8TE56 1095 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 PARD3BQ8TEW8 1205 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 BTN2A3PQ96KV6 586 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 PSMB7Q99436 277 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 PRMT1Q99873 361 aaKnown RBP6.89□□□□□ -1.31
CHD3-213ENST00000571249 WRAP53Q9BUR4 548 aaKnown RBP6.89□□□□□ -1.31
CHD3-213ENST00000571249 ZDHHC6Q9H6R6 413 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 SUDS3Q9H7L9 328 aaPredicted RBP6.89□□□□□ -1.31
CHD3-213ENST00000571249 APOBEC3GQ9HC16 384 aaKnown RBP6.89□□□□□ -1.31
CHD3-213ENST00000571249 PDE7BQ9NP56 450 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 CNGB3Q9NQW8 809 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 TAAR2Q9P1P5 351 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 MOSPD1Q9UJG1 213 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 FBXO2Q9UK22 296 aaPredicted RBP6.89□□□□□ -1.31
CHD3-213ENST00000571249 COQ6Q9Y2Z9 468 aa6.89□□□□□ -1.31
CHD3-213ENST00000571249 SRPRBQ9Y5M8 271 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms