RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 TDRD1Q9BXT4 1180 aaKnown RBP12.34□□□□□ -0.43
CTDNEP1-205ENST00000570828 GSDMCQ9BYG8 508 aa12.34□□□□□ -0.43
CTDNEP1-205ENST00000570828 DPEP2Q9H4A9 486 aa12.34□□□□□ -0.43
CTDNEP1-205ENST00000570828 DTLQ9NZJ0 730 aa12.34□□□□□ -0.43
CTDNEP1-205ENST00000570828 PPIL1Q9Y3C6 166 aa12.34□□□□□ -0.43
CTDNEP1-205ENST00000570828 ENTPD2Q9Y5L3 495 aa12.34□□□□□ -0.43
CTDNEP1-205ENST00000570828 CAPN8A6NHC0 703 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 ZNF487B1APH4 448 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 AKR1B15C9JRZ8 316 aaPredicted RBP12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 D6RAR5 112 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 NTN3O00634 580 aaPredicted RBP12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 APOL1O14791 398 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 KRT1P04264 644 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 RPLP0P05388 317 aaKnown RBP12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 GLB1P16278 677 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 GPR1P46091 355 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 GNPDA1P46926 289 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 RPL26P61254 145 aaKnown RBP12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 DPTQ07507 201 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 PTPRRQ15256 657 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 C14orf28Q4W4Y0 310 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 CERCAMQ5T4B2 595 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 DOK6Q6PKX4 331 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 VSIG1Q86XK7 387 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 CCNJLQ8IV13 435 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 SPACA3Q8IXA5 215 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 CBARPQ8N350 705 aaPredicted RBP12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 LPCAT1Q8NF37 534 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 GPR156Q8NFN8 814 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 WDR36Q8NI36 951 aaKnown RBP12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 LRRN4Q8WUT4 740 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 AP2M1Q96CW1 435 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 NAF1Q96HR8 494 aaKnown RBP12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 HIC2Q96JB3 615 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 MAK16Q9BXY0 300 aaKnown RBP12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 FRMD8Q9BZ67 464 aaPredicted RBP12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 STRADBQ9C0K7 418 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 ASCL3Q9NQ33 180 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 CD84Q9UIB8 345 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 SUFUQ9UMX1 484 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 RPL26L1Q9UNX3 145 aaKnown RBP12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 CHKBQ9Y259 395 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 PCDHGA8Q9Y5G5 932 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 HEY1Q9Y5J3 304 aa12.33□□□□□ -0.44
CTDNEP1-205ENST00000570828 CCDC187A0A096LP49 1063 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 TMX2-CTNND1H3BSU7 103 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 KCNK1O00180 336 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 CASC3O15234 703 aaKnown RBP12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 NOBOXO60393 691 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 MTA2O94776 668 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 JCHAINP01591 159 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 CEACAM5P06731 702 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 PYGLP06737 847 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 ZFXP17010 805 aaPredicted RBP12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 STC1P52823 247 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 PDX1P52945 283 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 CCL7P80098 99 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 TLE3Q04726 772 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 PPIDQ08752 370 aaKnown RBP12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 NIPAL4Q0D2K0 466 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 SLC10A2Q12908 348 aaPredicted RBP12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 PDK1Q15118 436 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 LRRC38Q5VT99 294 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 BROXQ5VW32 411 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 OGFOD3Q6PK18 319 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 IGF2-ASQ6U949 168 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 ADAMTSL4Q6UY14 1074 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 ZNF765Q7L2R6 523 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 TECPR1Q7Z6L1 1165 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 RHOT1Q8IXI2 618 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 ARL14Q8N4G2 192 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 PLD5Q8N7P1 536 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 Q8N9G6 341 aaPredicted RBP12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 CCL4L1Q8NHW4 92 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 ARRDC2Q8TBH0 407 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 KCNE4Q8WWG9 221 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 LIN37Q96GY3 246 aaPredicted RBP12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 FCRL3Q96P31 734 aaPredicted RBP12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 SMIM14Q96QK8 99 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 CDH19Q9H159 772 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 LRRN3Q9H3W5 708 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 PCDH9Q9HC56 1237 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 EPB41L5Q9HCM4 733 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 TRNAU1APQ9NX07 287 aaKnown RBP12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 INTUQ9ULD6 942 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 SLC17A4Q9Y2C5 497 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 ADAMTS20P59510 1910 aa12.32□□□□□ -0.44
CTDNEP1-205ENST00000570828 A0A0U1RQS6 177 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 A0A1W2PNU3 283 aaPredicted RBP12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 PPP1R12AO14974 1030 aaPredicted RBP12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 SPOPO43791 374 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 NUDT21O43809 227 aaKnown RBP12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 IVLP07476 585 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 TNNT1P13805 278 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 CD86P42081 329 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 SLC1A1P43005 524 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 INHBCP55103 352 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 IFI35P80217 286 aaPredicted RBP12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 PTSQ03393 145 aa12.31□□□□□ -0.44
CTDNEP1-205ENST00000570828 AP1B1Q10567 949 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms