RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 DPYSL2Q16555 572 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 TBR1Q16650 682 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 FILIP1LQ4L180 1135 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 BOLA3Q53S33 107 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 SNAP47Q5SQN1 464 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 CCDC183Q5T5S1 534 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 ARMC12Q5T9G4 340 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 TMEM164Q5U3C3 297 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 MARC1Q5VT66 337 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 LRRC66Q68CR7 880 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 PPP1R2P3Q6NXS1 205 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 USP45Q70EL2 814 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 C17orf82Q86X59 251 aaPredicted RBP8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 DTX1Q86Y01 620 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 CPNE8Q86YQ8 564 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 PSTKQ8IV42 348 aaKnown RBP8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 CBARPQ8N350 705 aaPredicted RBP8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 BBS5Q8N3I7 341 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 NSMCE1Q8WV22 266 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 PIH1D2Q8WWB5 315 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 HTR3CQ8WXA8 447 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 ART4Q93070 314 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 TMEM159Q96B96 161 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 AP2M1Q96CW1 435 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 RNF31Q96EP0 1072 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 SCRN2Q96FV2 425 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 ABCG8Q9H221 673 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 CLMPQ9H6B4 373 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 PCDH18Q9HCL0 1135 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 MRPL47Q9HD33 250 aaKnown RBP8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 TRNAU1APQ9NX07 287 aaKnown RBP8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 AIPL1Q9NZN9 384 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 AKAP7Q9P0M2 348 aaPredicted RBP8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 TMEM63CQ9P1W3 806 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 ACSL6Q9UKU0 697 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 MYO6Q9UM54 1294 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 TTLL3Q9Y4R7 772 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 B3GALT1Q9Y5Z6 326 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 SCINQ9Y6U3 715 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 A0A1W2PQC6 194 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 GOLGA6L22H0YM25 854 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 WISP1O95388 367 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 ASMTLO95671 621 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 EML2O95834 649 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 SOD1P00441 154 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 ATP1A1P05023 1023 aaKnown RBP8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 MYBL1P10243 752 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 PRKCIP41743 596 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 ZNF135P52742 658 aaPredicted RBP8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 CDH6P55285 790 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 DSC2Q02487 901 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 PTSQ03393 145 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 CLCA4Q14CN2 919 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 ATP13A4Q4VNC1 1196 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 TDRD12Q587J7 1177 aaKnown RBP8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 ZNF438Q7Z4V0 828 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 TECPR1Q7Z6L1 1165 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 FAM129CQ86XR2 697 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 ZSCAN1Q8NBB4 408 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 OR2M4Q96R27 311 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 MCCC1Q96RQ3 725 aaPredicted RBP8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 RIOK2Q9BVS4 552 aaKnown RBP8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 NAT10Q9H0A0 1025 aaKnown RBP8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 THAP2Q9H0W7 228 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 ISCUQ9H1K1 167 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 OCIAD1Q9NX40 245 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 KCNK4Q9NYG8 393 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 ANAPC7Q9UJX3 599 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 CHKBQ9Y259 395 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 SLC17A4Q9Y2C5 497 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 PCYT1BQ9Y5K3 369 aaPredicted RBP8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 DOPEY2Q9Y3R5 2298 aa8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 ZFC3H1O60293 1989 aaKnown RBP8.57□□□□□ -1.04
CTDNEP1-203ENST00000570385 MAST4O15021 2626 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 IGHV1OR21-1A0A087WYE8 117 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 A0A1W2PQ67 120 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 EFCAB7A8K855 629 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 STMND1H3BQB6 276 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 PSMD11O00231 422 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 MFSD11O43934 449 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 SERPINC1P01008 464 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 ITGB2P05107 769 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 IVLP07476 585 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 ITGB6P18564 788 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 IL4RP24394 825 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 NFKBIAP25963 317 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 CSTF2P33240 577 aaKnown RBP eCLIP8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 UGT1A3P35503 534 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 MAPK9P45984 424 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 GPR3P46089 330 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 LIMK2P53671 638 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 EPHB1P54762 984 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 SLC25A11Q02978 314 aaKnown RBP8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 NFATC2Q13469 925 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 PIGHQ14442 188 aaPredicted RBP8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 NR1D2Q14995 579 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 NFKBIBQ15653 356 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 PYCR3Q53H96 274 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 CCDC122Q5T0U0 273 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 ANKS6Q68DC2 871 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms