RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 ANKMY1Q9P2S6 941 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 SEPT3Q9UH03 358 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 KLHL3Q9UH77 587 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 CACNA1DQ01668 2161 aa12.03□□□□□ -0.48
CAPN3-220ENST00000569827 LOC101059948A0A1B0GTJ6 334 aa12.02□□□□□ -0.49
CAPN3-220ENST00000569827 LGALS16A8MUM7 142 aa12.02□□□□□ -0.49
CAPN3-220ENST00000569827 INPP4BO15327 924 aa12.02□□□□□ -0.49
CAPN3-220ENST00000569827 MAP3K6O95382 1288 aa12.02□□□□□ -0.49
CAPN3-220ENST00000569827 PEX11BO96011 259 aa12.02□□□□□ -0.49
CAPN3-220ENST00000569827 SOD1P00441 154 aa12.02□□□□□ -0.49
CAPN3-220ENST00000569827 TPM2P07951 284 aa12.02□□□□□ -0.49
CAPN3-220ENST00000569827 CR2P20023 1033 aa12.02□□□□□ -0.49
CAPN3-220ENST00000569827 NR1D1P20393 614 aa12.02□□□□□ -0.49
CAPN3-220ENST00000569827 GPR1P46091 355 aa12.02□□□□□ -0.49
CAPN3-220ENST00000569827 NFATC2Q13469 925 aa12.02□□□□□ -0.49
CAPN3-220ENST00000569827 DPYSQ14117 519 aa12.02□□□□□ -0.49
CAPN3-220ENST00000569827 FAM182AQ5T1J6 154 aa12.02□□□□□ -0.49
CAPN3-220ENST00000569827 XKR5Q6UX68 686 aa12.02□□□□□ -0.49
CAPN3-220ENST00000569827 AGBL5Q8NDL9 886 aa12.02□□□□□ -0.49
CAPN3-220ENST00000569827 OR4D9Q8NGE8 314 aa12.02□□□□□ -0.49
CAPN3-220ENST00000569827 OR2M4Q96R27 311 aa12.02□□□□□ -0.49
CAPN3-220ENST00000569827 ABCG8Q9H221 673 aa12.02□□□□□ -0.49
CAPN3-220ENST00000569827 TRNAU1APQ9NX07 287 aaKnown RBP12.02□□□□□ -0.49
CAPN3-220ENST00000569827 SLC17A4Q9Y2C5 497 aa12.02□□□□□ -0.49
CAPN3-220ENST00000569827 MRPS18BQ9Y676 258 aaKnown RBP12.02□□□□□ -0.49
CAPN3-220ENST00000569827 PRRC2CQ9Y520 2896 aaKnown RBP12.01□□□□□ -0.49
CAPN3-220ENST00000569827 SHANK1Q9Y566 2161 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 PDE2AO00408 941 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-220ENST00000569827 HTRA2O43464 458 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-220ENST00000569827 PRPSAP2O60256 369 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 PDHA1P08559 390 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 SFTPCP11686 197 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 IL1R2P27930 398 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 OAS2P29728 719 aaKnown RBP12.01□□□□□ -0.49
CAPN3-220ENST00000569827 CCR10P46092 362 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 NSUN2Q08J23 767 aaKnown RBP eCLIP12.01□□□□□ -0.49
CAPN3-220ENST00000569827 RFTN1Q14699 578 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-220ENST00000569827 DEFB109BQ30KR1 87 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 LRRC66Q68CR7 880 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 C16orf46Q6P387 395 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 TIPARPQ7Z3E1 657 aaKnown RBP12.01□□□□□ -0.49
CAPN3-220ENST00000569827 BMPERQ8N8U9 685 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 LRRN4Q8WUT4 740 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 HSPH1Q92598 858 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 NUDCD1Q96RS6 583 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 SYT11Q9BT88 431 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 CDH19Q9H159 772 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 ADNPQ9H2P0 1102 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 ZWILCHQ9H900 591 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 GPN2Q9H9Y4 310 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-220ENST00000569827 PLAAQ9Y263 795 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 PCDHGA3Q9Y5H0 932 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 OAS3Q9Y6K5 1087 aaKnown RBP12.01□□□□□ -0.49
CAPN3-220ENST00000569827 CCDC88CQ9P219 2028 aa12.01□□□□□ -0.49
CAPN3-220ENST00000569827 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12□□□□□ -0.49
CAPN3-220ENST00000569827 SOCS5O75159 536 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 LRCH4O75427 683 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 PGLSO95336 258 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 ASMTLO95671 621 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 ATP1A1P05023 1023 aaKnown RBP12□□□□□ -0.49
CAPN3-220ENST00000569827 IVLP07476 585 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 CYP2A6P11509 494 aaPredicted RBP12□□□□□ -0.49
CAPN3-220ENST00000569827 HTR7P34969 479 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 GPR3P46089 330 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 UBAP2LQ14157 1087 aaKnown RBP12□□□□□ -0.49
CAPN3-220ENST00000569827 IHHQ14623 411 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 ESPL1Q14674 2120 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 PYCR3Q53H96 274 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 DCAF12Q5T6F0 453 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 E4F1Q66K89 784 aaPredicted RBP12□□□□□ -0.49
CAPN3-220ENST00000569827 HIST2H2BCQ6DN03 193 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 TXNRD3NBQ6F5E7 133 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 PLEKHA7Q6IQ23 1121 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 TMEM71Q6P5X7 295 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 TECPR1Q7Z6L1 1165 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 CBARPQ8N350 705 aaPredicted RBP12□□□□□ -0.49
CAPN3-220ENST00000569827 CCDC112Q8NEF3 446 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 C9orf43Q8TAL5 461 aaPredicted RBP12□□□□□ -0.49
CAPN3-220ENST00000569827 AP2M1Q96CW1 435 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 RTP4Q96DX8 246 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 AHCYL2Q96HN2 611 aaKnown RBP12□□□□□ -0.49
CAPN3-220ENST00000569827 SLC38A3Q99624 504 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 MGME1Q9BQP7 344 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 DDA1Q9BW61 102 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 ARFGAP3Q9NP61 516 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 NT5MQ9NPB1 228 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 PARVAQ9NVD7 372 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 MYO1AQ9UBC5 1043 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 PILRAQ9UKJ1 303 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 PHTF1Q9UMS5 762 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 KCNK6Q9Y257 313 aa12□□□□□ -0.49
CAPN3-220ENST00000569827 NOTCH2Q04721 2471 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 TMEM191CA6NGB0 347 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 ZNF891A8MT65 544 aaPredicted RBP11.99□□□□□ -0.49
CAPN3-220ENST00000569827 K7EM74 188 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 MAFKO60675 156 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 SNX2O60749 519 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 ATP1A3P13637 1013 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 FERP16591 822 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 DESP17661 470 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms