RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 TEAD1P28347 426 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 SERPINB6P35237 376 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 ADCY8P40145 1251 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 SSR1P43307 286 aaKnown RBP13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 STC1P52823 247 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 OR1D5P58170 312 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 CTBSQ01459 385 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 CFHR1Q03591 330 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 DPTQ07507 201 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 VAC14Q08AM6 782 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 C16orf72Q14CZ0 275 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 ANKRD20A8PQ5CZ79 823 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 RALGPS1Q5JS13 557 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 RAET1GQ6H3X3 334 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 DOK6Q6PKX4 331 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 SLC30A9Q6PML9 568 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 NAGSQ8N159 534 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 FBXO39Q8N4B4 442 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 RAPGEF5Q92565 580 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 PMEPA1Q969W9 287 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 SCARF2Q96GP6 870 aaPredicted RBP13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 NUDT22Q9BRQ3 303 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 TDRD1Q9BXT4 1180 aaKnown RBP13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 BRD8Q9H0E9 1235 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 PHPT1Q9NRX4 125 aaPredicted RBP13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 FOXJ2Q9P0K8 574 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 PISDQ9UG56 409 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 CHKBQ9Y259 395 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 LOXL2Q9Y4K0 774 aa13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 OAS3Q9Y6K5 1087 aaKnown RBP13.8□□□□□ -0.2
GTF3C1-211ENST00000569653 A0A1W2PQ67 120 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 GOLGA6CA6NDK9 693 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 GOLGA6BA6NDN3 693 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 K7ENP7 123 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 ERVH48-1M5A8F1 160 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 NUDT21O43809 227 aaKnown RBP13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 ECEL1O95672 775 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 IVLP07476 585 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 TPM1P09493 284 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 GOLGA6DP0CG33 693 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 PNLIPP16233 465 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 WT1P19544 449 aaPredicted RBP13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 CSF2RBP32927 897 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 MLLT3P42568 568 aaPredicted RBP13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 ARSDP51689 593 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 UCNP55089 124 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 LY6DQ14210 128 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 NR1D2Q14995 579 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 INO80CQ6PI98 192 aaPredicted RBP13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 USP45Q70EL2 814 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 ARL14Q8N4G2 192 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 CNTD1Q8N815 330 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 LSM14AQ8ND56 463 aaKnown RBP13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 OR6C4Q8NGE1 309 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 ZDHHC1Q8WTX9 485 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 TSGA13Q96PP4 275 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 ZNF670Q9BS34 389 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 RBSNQ9H1K0 784 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 RBM22Q9NW64 420 aaKnown RBP eCLIP13.79□□□□□ -0.25e-6■■■■■ 33.5
GTF3C1-211ENST00000569653 TRNAU1APQ9NX07 287 aaKnown RBP13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 GOLGA6AQ9NYA3 693 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 DTLQ9NZJ0 730 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 ACSL6Q9UKU0 697 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 CNOT6Q9ULM6 557 aaKnown RBP13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 PCDHGA7Q9Y5G6 932 aa13.79□□□□□ -0.2
GTF3C1-211ENST00000569653 PRAMEF33A0A0G2JMD5 474 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 CAPN8A6NHC0 703 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 C3orf70A6NLC5 250 aaPredicted RBP13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 EIF4E1BA6NMX2 242 aaKnown RBP13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 C9orf172C9J069 976 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 MATN3O15232 486 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 PPM1DO15297 605 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 PRAMEF10O60809 474 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 CLDN7O95471 211 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 CD1CP29017 333 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 ZBTB17Q13105 803 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 BROXQ5VW32 411 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 ADAMTSL4Q6UY14 1074 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 BBS5Q8N3I7 341 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 PLD5Q8N7P1 536 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 FATE1Q969F0 183 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 AP2M1Q96CW1 435 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 EID2BQ96D98 161 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 COX14Q96I36 57 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 TMEM74Q96NL1 305 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 RIOK2Q9BVS4 552 aaKnown RBP13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 GSDMCQ9BYG8 508 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 POLR1EQ9GZS1 481 aaKnown RBP13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 TMEM9Q9P0T7 183 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 CTTNBP2NLQ9P2B4 639 aa13.78□□□□□ -0.2
GTF3C1-211ENST00000569653 FADS2P1A8MWK0 482 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 PDE2AO00408 941 aaPredicted RBP13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 CCL4P13236 92 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 PLA2G2AP14555 144 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 CCNCP24863 283 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 GPR1P46091 355 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 RHDQ02161 417 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 ITKQ08881 620 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 C19orf57Q0VDD7 668 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 ILF3Q12906 894 aaKnown RBP eCLIP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms