RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 OMPP47874 163 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 GPR15P49685 360 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 FGL1Q08830 312 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 NDUFA9Q16795 377 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 NKAPLQ5M9Q1 402 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 GPRIN3Q6ZVF9 776 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 LNX1Q8TBB1 728 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-216ENST00000569240 PIH1D2Q8WWB5 315 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 RXFP2Q8WXD0 754 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 UFD1Q92890 307 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 RNF157Q96PX1 679 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 CRLS1Q9UJA2 301 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 SPATA31A6Q5VVP1 1343 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 FAM86C2PA6NEL3 165 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 H0YIN7 160 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 STX16-NPEPL1H3BU86 382 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 STX16O14662 325 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 HMGN1P05114 100 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 HGFP14210 728 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 GRK4P32298 578 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 TCF7P36402 384 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-216ENST00000569240 IL2P60568 153 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 PON3Q15166 354 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 ZIK1Q3SY52 487 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-216ENST00000569240 ZNF367Q7RTV3 350 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 SLC4A11Q8NBS3 891 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 NKX2-3Q8TAU0 364 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 STOML3Q8TAV4 291 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 CCDC115Q96NT0 180 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 BLOC1S4Q9NUP1 217 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 ENTPD3O75355 529 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 CYP3A4P08684 503 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 TFEBP19484 476 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 MGAT1P26572 445 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 WDR4P57081 412 aaKnown RBP7.1□□□□□ -1.27
CNOT1-216ENST00000569240 TXNL4AP83876 142 aaKnown RBP7.1□□□□□ -1.27
CNOT1-216ENST00000569240 ACSM2AQ08AH3 577 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 IKBKEQ14164 716 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 EARS2Q5JPH6 523 aaKnown RBP7.1□□□□□ -1.27
CNOT1-216ENST00000569240 MPP7Q5T2T1 576 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 KANK2Q63ZY3 851 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 ACSM2BQ68CK6 577 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 CCDC71Q8IV32 467 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-216ENST00000569240 TBL1YQ9BQ87 522 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 C7orf50Q9BRJ6 194 aaKnown RBP7.1□□□□□ -1.27
CNOT1-216ENST00000569240 OPTCQ9UBM4 332 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 PPEF2O14830 753 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 NDUFB5O43674 189 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 SEC22BO75396 215 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 GSTM1P09488 218 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 OR56A5P0C7T3 313 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 NCF1P14598 390 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-216ENST00000569240 ITGB6P18564 788 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 IDH3AP50213 366 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 LIPEQ05469 1076 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 NOMO1Q15155 1222 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 TIGD6Q17RP2 521 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 GOLGA7BQ2TAP0 167 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 LSM12Q3MHD2 195 aaKnown RBP7.1□□□□□ -1.27
CNOT1-216ENST00000569240 FNBP1LQ5T0N5 605 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 PIK3R6Q5UE93 754 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 AGAP7PQ5VUJ5 663 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 ZCCHC23Q6ZST2 131 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 UNC93AQ86WB7 457 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 ZNF34Q8IZ26 560 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 SCML4Q8N228 414 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 OR8K5Q8NH50 307 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 SLC38A4Q969I6 547 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 TMEM176AQ96HP8 235 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 PNMA5Q96PV4 448 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 NFKBIZQ9BYH8 718 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 FAM126AQ9BYI3 521 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-216ENST00000569240 IL25Q9H293 177 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 TNFRSF10DQ9UBN6 386 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 EIF3KQ9UBQ5 218 aaKnown RBP7.1□□□□□ -1.27
CNOT1-216ENST00000569240 SLC9A3R1O14745 358 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-216ENST00000569240 IRF6O14896 467 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 SPTLC1O15269 473 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 PRAF2O60831 178 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 ENTPD6O75354 484 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 OR6B1O95007 311 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 GLRBP48167 497 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 MAPK10P53779 464 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 ALDH6A1Q02252 535 aaKnown RBP7.1□□□□□ -1.27
CNOT1-216ENST00000569240 REP15Q6BDI9 236 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 GJB7Q6PEY0 223 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 MAP4K3Q8IVH8 894 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 ANKRD53Q8N9V6 530 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 DNAJB14Q8TBM8 379 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 MTMR9Q96QG7 549 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 SLC17A7Q9P2U7 560 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 CBY1Q9Y3M2 126 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 GLI2P10070 1586 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 DCAF8L1A6NGE4 600 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 CPNE3O75131 537 aaKnown RBP7.09□□□□□ -1.27
CNOT1-216ENST00000569240 IPO13O94829 963 aaKnown RBP7.09□□□□□ -1.27
CNOT1-216ENST00000569240 RLN2P04090 185 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 LSM3P62310 102 aaKnown RBP7.09□□□□□ -1.27
CNOT1-216ENST00000569240 MOGSQ13724 837 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 USF2Q15853 346 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms