RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 PPP6R3Q5H9R7 873 aaPredicted RBP14.8□□□□□ -0.04
USB1-214ENST00000568848 ZNF677Q86XU0 584 aa14.8□□□□□ -0.04
USB1-214ENST00000568848 PSMG3-AS1Q96PY0 264 aa14.8□□□□□ -0.04
USB1-214ENST00000568848 DDA1Q9BW61 102 aa14.8□□□□□ -0.04
USB1-214ENST00000568848 NOD2Q9HC29 1040 aa14.8□□□□□ -0.04
USB1-214ENST00000568848 ETNK2Q9NVF9 386 aa14.8□□□□□ -0.04
USB1-214ENST00000568848 TMEM51Q9NW97 253 aa14.8□□□□□ -0.04
USB1-214ENST00000568848 SLC17A4Q9Y2C5 497 aa14.8□□□□□ -0.04
USB1-214ENST00000568848 RP1L1Q8IWN7 2480 aaPredicted RBP14.8□□□□□ -0.04
USB1-214ENST00000568848 CFAP69A5D8W1 941 aa14.79□□□□□ -0.04
USB1-214ENST00000568848 ARHGAP42A6NI28 874 aa14.79□□□□□ -0.04
USB1-214ENST00000568848 PRR19A6NJB7 356 aa14.79□□□□□ -0.04
USB1-214ENST00000568848 KRT7P08729 469 aa14.79□□□□□ -0.04
USB1-214ENST00000568848 TCF4P15884 667 aa14.79□□□□□ -0.04
USB1-214ENST00000568848 CSNK1DP48730 415 aa14.79□□□□□ -0.04
USB1-214ENST00000568848 NDST2P52849 883 aa14.79□□□□□ -0.04
USB1-214ENST00000568848 IHHQ14623 411 aa14.79□□□□□ -0.04
USB1-214ENST00000568848 GRM3Q14832 879 aa14.79□□□□□ -0.04
USB1-214ENST00000568848 C4orf17Q53FE4 359 aa14.79□□□□□ -0.04
USB1-214ENST00000568848 DCAF12Q5T6F0 453 aa14.79□□□□□ -0.04
USB1-214ENST00000568848 RFX8Q6ZV50 586 aa14.79□□□□□ -0.04
USB1-214ENST00000568848 LRRN4Q8WUT4 740 aa14.79□□□□□ -0.04
USB1-214ENST00000568848 STARD8Q92502 1023 aa14.79□□□□□ -0.04
USB1-214ENST00000568848 CNPY3Q9BT09 278 aa14.79□□□□□ -0.04
USB1-214ENST00000568848 SPRY4Q9C004 299 aa14.79□□□□□ -0.04
USB1-214ENST00000568848 CDH19Q9H159 772 aa14.79□□□□□ -0.04
USB1-214ENST00000568848 TRNAU1APQ9NX07 287 aaKnown RBP14.79□□□□□ -0.04
USB1-214ENST00000568848 SIK3Q9Y2K2 1263 aa14.79□□□□□ -0.04
USB1-214ENST00000568848 STK17BO94768 372 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 PEX11BO96011 259 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 PDGFAP04085 211 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 CALB1P05937 261 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 PDHA1P08559 390 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 PSMA2P25787 234 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 GSCP56915 257 aaPredicted RBP14.78□□□□□ -0.04
USB1-214ENST00000568848 LBRQ14739 615 aaKnown RBP14.78□□□□□ -0.04
USB1-214ENST00000568848 SYCP1Q15431 976 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 TSR1Q2NL82 804 aaKnown RBP14.78□□□□□ -0.04
USB1-214ENST00000568848 TMEM71Q6P5X7 295 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 DCUN1D2Q6PH85 259 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 TRIM72Q6ZMU5 477 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 KDELC2Q7Z4H8 507 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 NLGN4XQ8N0W4 816 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 NLGN4YQ8NFZ3 816 aaPredicted RBP14.78□□□□□ -0.04
USB1-214ENST00000568848 NCSTNQ92542 709 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 MIB2Q96AX9 1013 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 ELMO2Q96JJ3 720 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 SLC45A3Q96JT2 553 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 OR2M4Q96R27 311 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 SLC38A3Q99624 504 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 TBC1D10AQ9BXI6 508 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 ABCG8Q9H221 673 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 CLSTN2Q9H4D0 955 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 ARFGAP3Q9NP61 516 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 KCNK6Q9Y257 313 aa14.78□□□□□ -0.04
USB1-214ENST00000568848 OAS3Q9Y6K5 1087 aaKnown RBP14.78□□□□□ -0.04
USB1-214ENST00000568848 DAPK3O43293 454 aa14.77□□□□□ -0.05
USB1-214ENST00000568848 DNAJB5O75953 348 aa14.77□□□□□ -0.05
USB1-214ENST00000568848 ATP1A1P05023 1023 aaKnown RBP14.77□□□□□ -0.05
USB1-214ENST00000568848 AMPD1P23109 780 aa14.77□□□□□ -0.05
USB1-214ENST00000568848 GPR1P46091 355 aa14.77□□□□□ -0.05
USB1-214ENST00000568848 GFERP55789 205 aa14.77□□□□□ -0.05
USB1-214ENST00000568848 LACTB2Q53H82 288 aaPredicted RBP14.77□□□□□ -0.05
USB1-214ENST00000568848 ZNF648Q5T619 568 aaPredicted RBP14.77□□□□□ -0.05
USB1-214ENST00000568848 MCOLN2Q8IZK6 566 aa14.77□□□□□ -0.05
USB1-214ENST00000568848 CBARPQ8N350 705 aaPredicted RBP14.77□□□□□ -0.05
USB1-214ENST00000568848 FAM26EQ8N5C1 309 aa14.77□□□□□ -0.05
USB1-214ENST00000568848 AHCYL2Q96HN2 611 aaKnown RBP14.77□□□□□ -0.05
USB1-214ENST00000568848 PCMTD1Q96MG8 357 aaPredicted RBP14.77□□□□□ -0.05
USB1-214ENST00000568848 AGPAT1Q99943 283 aa14.77□□□□□ -0.05
USB1-214ENST00000568848 CWC15Q9P013 229 aaKnown RBP14.77□□□□□ -0.05
USB1-214ENST00000568848 ANAPC2Q9UJX6 822 aa14.77□□□□□ -0.05
USB1-214ENST00000568848 CENPEQ02224 2701 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 B4E171 279 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 HTRA2O43464 458 aaPredicted RBP14.76□□□□□ -0.05
USB1-214ENST00000568848 SNX2O60749 519 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 IVLP07476 585 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 MIPP30301 263 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 TSPAN7P41732 249 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 GPR3P46089 330 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 AP1S1P61966 158 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 SH3BP2P78314 561 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 MC2RQ01718 297 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 IL10RBQ08334 325 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 TRA2AQ13595 282 aaKnown RBP eCLIP14.76□□□□□ -0.05
USB1-214ENST00000568848 ZNF235Q14590 738 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 SMTNL2Q2TAL5 461 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 PYCR3Q53H96 274 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 LRRC66Q68CR7 880 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 TECPR1Q7Z6L1 1165 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 CCDC112Q8NEF3 446 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 PSKH2Q96QS6 385 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 RUFY1Q96T51 708 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 B3GNT4Q9C0J1 378 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 TBC1D29Q9UFV1 150 aa14.76□□□□□ -0.05
USB1-214ENST00000568848 PDE2AO00408 941 aaPredicted RBP14.75□□□□□ -0.05
USB1-214ENST00000568848 ASMTLO95671 621 aa14.75□□□□□ -0.05
USB1-214ENST00000568848 DLGAP3O95886 979 aa14.75□□□□□ -0.05
USB1-214ENST00000568848 TCN2P20062 427 aa14.75□□□□□ -0.05
USB1-214ENST00000568848 GNLYP22749 145 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms