RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 PTRH1Q86Y79 214 aaKnown RBP15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 NPWQ8N729 165 aa15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 BMPERQ8N8U9 685 aa15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 PDCD6IPQ8WUM4 868 aaKnown RBP15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 SH3KBP1Q96B97 665 aa15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 MCCC1Q96RQ3 725 aaPredicted RBP15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 SLC38A3Q99624 504 aa15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 MGME1Q9BQP7 344 aa15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 SNRNP25Q9BV90 132 aaKnown RBP15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 STN1Q9H668 368 aaKnown RBP15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 SUDS3Q9H7L9 328 aaPredicted RBP15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 GPATCH2LQ9NWQ4 482 aa15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 PPIL1Q9Y3C6 166 aa15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 PCDHGC4Q9Y5F7 938 aa15.69■□□□□ 0.1
HERPUD1-215ENST00000568676 GOLGA6CA6NDK9 693 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 GOLGA6BA6NDN3 693 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 EFCAB7A8K855 629 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 GOLGA6DP0CG33 693 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 GP1BBP13224 206 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 CSF2RBP32927 897 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 GPR1P46091 355 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 MC2RQ01718 297 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 SEPT6Q14141 434 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 CA9Q16790 459 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 PPP6R3Q5H9R7 873 aaPredicted RBP15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 NKAIN2Q5VXU1 208 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 DENND2CQ68D51 928 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 PLEKHA7Q6IQ23 1121 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 ARHGAP36Q6ZRI8 547 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 Q6ZVL8 140 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 ZNF765Q7L2R6 523 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 HSD11B1LQ7Z5J1 315 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 NRSN1Q8IZ57 195 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 SFRP1Q8N474 314 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 NSMCE1Q8WV22 266 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 APOBEC4Q8WW27 367 aaKnown RBP15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 PATE1Q8WXA2 126 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 PMEPA1Q969W9 287 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 KCTD15Q96SI1 283 aaPredicted RBP15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 SPRY4Q9C004 299 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 EPB41L1Q9H4G0 881 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 FBXO8Q9NRD0 319 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 OCIAD1Q9NX40 245 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 GOLGA6AQ9NYA3 693 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 DNPEPQ9ULA0 475 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 ST14Q9Y5Y6 855 aa15.68■□□□□ 0.1
HERPUD1-215ENST00000568676 CLEC18AA5D8T8 446 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 LGALS16A8MUM7 142 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 PGLSO95336 258 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 SLC2A4P14672 509 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 ZNF30P17039 623 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 LHCGRP22888 699 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 EPHA4P54764 986 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 CDC20Q12834 499 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 DPYSQ14117 519 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 SKIDA1Q1XH10 827 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 PYCR3Q53H96 274 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 ARMC12Q5T9G4 340 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 ANKS6Q68DC2 871 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 CLEC18BQ6UXF7 455 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 ARHGAP22Q7Z5H3 698 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 TECPR1Q7Z6L1 1165 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 GALNT13Q8IUC8 556 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 PIAS4Q8N2W9 510 aaPredicted RBP15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 AVL9Q8NBF6 648 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 CLEC18CQ8NCF0 446 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 RTP4Q96DX8 246 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 NSMCE3Q96MG7 304 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 ERGIC2Q96RQ1 377 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 SARS2Q9NP81 518 aaKnown RBP15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 PCSK1NQ9UHG2 260 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 MYO6Q9UM54 1294 aa15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 TMEM184BQ9Y519 407 aaPredicted RBP15.67■□□□□ 0.1
HERPUD1-215ENST00000568676 TMEM191CA6NGB0 347 aa15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 NPIPB15A6NHN6 443 aaPredicted RBP15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 H3BRJ5 948 aa15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 MIPP30301 263 aa15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 SERPINB6P35237 376 aa15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 ARL4AP40617 200 aa15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 POLD2P49005 469 aa15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 PPM1FP49593 454 aaPredicted RBP15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 COPB1P53618 953 aaKnown RBP15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 CDH6P55285 790 aa15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 MAP7Q14244 749 aa15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 TMCO3Q6UWJ1 677 aa15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 LRRC49Q8IUZ0 686 aa15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 EXD1Q8NHP7 514 aa15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 SLC37A2Q8TED4 501 aa15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 AP2M1Q96CW1 435 aa15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 PEBP4Q96S96 227 aa15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 NOD2Q9HC29 1040 aa15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 CWC15Q9P013 229 aaKnown RBP15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 TMEM9Q9P0T7 183 aa15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 VPS18Q9P253 973 aa15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 LIMA1Q9UHB6 759 aaKnown RBP15.66■□□□□ 0.1
HERPUD1-215ENST00000568676 PEX11BO96011 259 aa15.65■□□□□ 0.1
HERPUD1-215ENST00000568676 TNFAIP3P21580 790 aa15.65■□□□□ 0.1
HERPUD1-215ENST00000568676 MPSTP25325 297 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms