RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 CLPTM1LQ96KA5 538 aa18.08■□□□□ 0.49
SMPD3-211ENST00000568373 GSTO2Q9H4Y5 243 aa18.08■□□□□ 0.49
SMPD3-211ENST00000568373 ZNF385DQ9H6B1 395 aa18.08■□□□□ 0.49
SMPD3-211ENST00000568373 BPIFA1Q9NP55 256 aa18.08■□□□□ 0.49
SMPD3-211ENST00000568373 PLK2Q9NYY3 685 aa18.08■□□□□ 0.49
SMPD3-211ENST00000568373 H0Y3Z8 333 aa18.08■□□□□ 0.48
SMPD3-211ENST00000568373 H3BMM5 538 aa18.08■□□□□ 0.48
SMPD3-211ENST00000568373 PFDN6O15212 129 aa18.08■□□□□ 0.48
SMPD3-211ENST00000568373 SLC22A2O15244 555 aa18.08■□□□□ 0.48
SMPD3-211ENST00000568373 PPARGP37231 505 aaPredicted RBP18.08■□□□□ 0.48
SMPD3-211ENST00000568373 PEX6Q13608 980 aa18.08■□□□□ 0.48
SMPD3-211ENST00000568373 ACCSLQ4AC99 568 aa18.08■□□□□ 0.48
SMPD3-211ENST00000568373 ZNF678Q5SXM1 525 aa18.08■□□□□ 0.48
SMPD3-211ENST00000568373 ARMC12Q5T9G4 340 aa18.08■□□□□ 0.48
SMPD3-211ENST00000568373 RPS27LQ71UM5 84 aaKnown RBP18.08■□□□□ 0.48
SMPD3-211ENST00000568373 NET1Q7Z628 596 aaPredicted RBP18.08■□□□□ 0.48
SMPD3-211ENST00000568373 CUZD1Q86UP6 607 aa18.08■□□□□ 0.48
SMPD3-211ENST00000568373 AFAP1L2Q8N4X5 818 aa18.08■□□□□ 0.48
SMPD3-211ENST00000568373 MYO19Q96H55 970 aa18.08■□□□□ 0.48
SMPD3-211ENST00000568373 BIRC8Q96P09 236 aa18.08■□□□□ 0.48
SMPD3-211ENST00000568373 LENG8Q96PV6 779 aaPredicted RBP18.08■□□□□ 0.48
SMPD3-211ENST00000568373 CORO1BQ9BR76 489 aa18.08■□□□□ 0.48
SMPD3-211ENST00000568373 TFB2MQ9H5Q4 396 aaKnown RBP18.08■□□□□ 0.48
SMPD3-211ENST00000568373 SLC7A8Q9UHI5 535 aa18.08■□□□□ 0.48
SMPD3-211ENST00000568373 FAM50BQ9Y247 325 aa18.08■□□□□ 0.48
SMPD3-211ENST00000568373 ZNF711Q9Y462 761 aa18.08■□□□□ 0.48
SMPD3-211ENST00000568373 A0A088AWK7 358 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 SMAD6O43541 496 aaKnown RBP18.07■□□□□ 0.48
SMPD3-211ENST00000568373 CIB2O75838 187 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 PGLSO95336 258 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 GNAZP19086 355 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 ADSLP30566 484 aaPredicted RBP18.07■□□□□ 0.48
SMPD3-211ENST00000568373 HERVK_113P63132 956 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 LMAN2Q12907 356 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 OR4D1Q15615 310 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 PTPRNQ16849 979 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 SETMARQ53H47 684 aaPredicted RBP18.07■□□□□ 0.48
SMPD3-211ENST00000568373 NXNQ6DKJ4 435 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 PAQR3Q6TCH7 311 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 TPGS1Q6ZTW0 290 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 ERVK-6Q9BXR3 956 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 DERL2Q9GZP9 239 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 MAGEE1Q9HCI5 957 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 ASAH2Q9NR71 780 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 KIAA1522Q9P206 1035 aaPredicted RBP18.07■□□□□ 0.48
SMPD3-211ENST00000568373 CLEC4EQ9ULY5 219 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 A0A0U1RQS6 177 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 LCHNA4D1U4 455 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 LEFTY2O00292 366 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 SDHDO14521 159 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 PFKLP17858 780 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 PIK3R1P27986 724 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 SATB1Q01826 763 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 TRMT5Q32P41 509 aaKnown RBP18.07■□□□□ 0.48
SMPD3-211ENST00000568373 ZRANB3Q5FWF4 1079 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 OR6K2Q8NGY2 324 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 FIBINQ8TAL6 211 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 PIH1D2Q8WWB5 315 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 ATOH8Q96SQ7 321 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 TCF25Q9BQ70 676 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 SLC46A2Q9BY10 475 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 TNFRSF12AQ9NP84 129 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 IL17CQ9P0M4 197 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 C15orf41Q9Y2V0 281 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 PKP3Q9Y446 797 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 INSL6Q9Y581 213 aa18.07■□□□□ 0.48
SMPD3-211ENST00000568373 OAS3Q9Y6K5 1087 aaKnown RBP18.07■□□□□ 0.48
SMPD3-211ENST00000568373 SUPT7LO94864 414 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 GLUD1P00367 558 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 THRAP10827 490 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 MTHFD2P13995 350 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 HMGCLP35914 325 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 CCNG1P51959 295 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 CUL3Q13618 768 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 UNC50Q53HI1 259 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 AARS2Q5JTZ9 985 aaKnown RBP18.06■□□□□ 0.48
SMPD3-211ENST00000568373 C6orf163Q5TEZ5 329 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 TMEM198Q66K66 360 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 CAMK1DQ8IU85 385 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 KIRREL3Q8IZU9 778 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 CFAP61Q8NHU2 1237 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 SLC22A17Q8WUG5 538 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 STMN2Q93045 179 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 EXT2Q93063 718 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 KIAA1191Q96A73 305 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 CATSPER2Q96P56 530 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 RTKNQ9BST9 563 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 EMILIN2Q9BXX0 1053 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 GPR63Q9BZJ6 419 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 EVLQ9UI08 416 aaPredicted RBP18.06■□□□□ 0.48
SMPD3-211ENST00000568373 ARHGAP26Q9UNA1 814 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 FNDC3AQ9Y2H6 1198 aaKnown RBP18.06■□□□□ 0.48
SMPD3-211ENST00000568373 DOCK6Q96HP0 2047 aa18.06■□□□□ 0.48
SMPD3-211ENST00000568373 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.05■□□□□ 0.48
SMPD3-211ENST00000568373 RGSL1A5PLK6 1076 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 CCL16O15467 120 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 SKAP2O75563 359 aaPredicted RBP18.05■□□□□ 0.48
SMPD3-211ENST00000568373 PRAMEF12O95522 483 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 PYGLP06737 847 aa18.05■□□□□ 0.48
SMPD3-211ENST00000568373 PKMP14618 531 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms