RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 BUD23O43709 281 aaKnown RBP12.96□□□□□ -0.33
CNOT1-213ENST00000568158 SOD1P00441 154 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 TNFP01375 233 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 IFNB1P01574 187 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 SLC4A1P02730 911 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 FUCA1P04066 466 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 HOXC4P09017 264 aaPredicted RBP12.96□□□□□ -0.33
CNOT1-213ENST00000568158 ZSCAN5DPP0CG00 497 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 GIMD1P0DJR0 217 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 NME1P15531 152 aaKnown RBP12.96□□□□□ -0.33
CNOT1-213ENST00000568158 TSHRP16473 764 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 HTR1BP28222 390 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 GRK6P43250 576 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 POLD2P49005 469 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 SRP54P61011 504 aaKnown RBP12.96□□□□□ -0.33
CNOT1-213ENST00000568158 DPTQ07507 201 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 TCEA2Q15560 299 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 ALG11Q2TAA5 492 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 SLCO6A1Q86UG4 719 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 HEATR4Q86WZ0 1026 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 PHACTR4Q8IZ21 702 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 RASGEF1CQ8N431 466 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 TTC30BQ8N4P2 665 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 BAHD1Q8TBE0 780 aaPredicted RBP12.96□□□□□ -0.33
CNOT1-213ENST00000568158 BLOC1S5Q8TDH9 187 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 LMX1AQ8TE12 382 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 COG1Q8WTW3 980 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 MAIP1Q8WWC4 291 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 OR1E3Q8WZA6 343 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 WDR92Q96MX6 357 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 FSD1LQ9BXM9 530 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 TEX101Q9BY14 249 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 CLPBQ9H078 707 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 ETNK1Q9HBU6 452 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 SMARCAL1Q9NZC9 954 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 PKD2L2Q9NZM6 624 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 MOSPD1Q9UJG1 213 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 TMEM98Q9Y2Y6 226 aa12.96□□□□□ -0.33
CNOT1-213ENST00000568158 MED19A0JLT2 244 aaPredicted RBP12.95□□□□□ -0.34
CNOT1-213ENST00000568158 ZNF185O15231 689 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 INPP4BO15327 924 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 ZNF189O75820 626 aaPredicted RBP12.95□□□□□ -0.34
CNOT1-213ENST00000568158 LDOC1O95751 146 aaPredicted RBP12.95□□□□□ -0.34
CNOT1-213ENST00000568158 CELA2BP08218 269 aaPredicted RBP12.95□□□□□ -0.34
CNOT1-213ENST00000568158 MYF5P13349 255 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 HLA-DPA1P20036 260 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 TNNT3P45378 269 aaPredicted RBP12.95□□□□□ -0.34
CNOT1-213ENST00000568158 HK3P52790 923 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 KIAA1024LP59773 190 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 GNG11P61952 73 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 SIM1P81133 766 aaPredicted RBP12.95□□□□□ -0.34
CNOT1-213ENST00000568158 CDK3Q00526 305 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 MSLNQ13421 630 aaPredicted RBP12.95□□□□□ -0.34
CNOT1-213ENST00000568158 PTPRCAPQ14761 206 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 P3H1Q32P28 736 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 PRRT3Q5FWE3 981 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 ALS2CLQ60I27 953 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 KCTD11Q693B1 232 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 DENND5AQ6IQ26 1287 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 ZNF765Q7L2R6 523 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 TRIM74Q86UV6 250 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 KLHDC8BQ8IXV7 354 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 C17orf53Q8N3J3 647 aaPredicted RBP12.95□□□□□ -0.34
CNOT1-213ENST00000568158 PDCD7Q8N8D1 485 aaKnown RBP12.95□□□□□ -0.34
CNOT1-213ENST00000568158 PNPLA1Q8N8W4 532 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 PRELID2Q8N945 189 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 OR56A4Q8NGH8 313 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 PTCD2Q8WV60 388 aaKnown RBP12.95□□□□□ -0.34
CNOT1-213ENST00000568158 BTN2A2Q8WVV5 523 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 RTP4Q96DX8 246 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 OSBPL9Q96SU4 736 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 TBL1YQ9BQ87 522 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 AP1M1Q9BXS5 423 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 WDR26Q9H7D7 661 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 SUDS3Q9H7L9 328 aaPredicted RBP12.95□□□□□ -0.34
CNOT1-213ENST00000568158 FGF22Q9HCT0 170 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 PHPT1Q9NRX4 125 aaPredicted RBP12.95□□□□□ -0.34
CNOT1-213ENST00000568158 KLQ9UEF7 1012 aa12.95□□□□□ -0.34
CNOT1-213ENST00000568158 APOBEC3BQ9UH17 382 aaKnown RBP12.95□□□□□ -0.34
CNOT1-213ENST00000568158 CNOT6Q9ULM6 557 aaKnown RBP12.95□□□□□ -0.34
CNOT1-213ENST00000568158 RGSL1A5PLK6 1076 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 FADS2P1A8MWK0 482 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 H3BM21 787 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 PDE2AO00408 941 aaPredicted RBP12.94□□□□□ -0.34
CNOT1-213ENST00000568158 AQP9O43315 295 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 SIGLEC6O43699 453 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 FGF1P05230 155 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 CEACAM5P06731 702 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 MYCLP1P12525 358 aaPredicted RBP12.94□□□□□ -0.34
CNOT1-213ENST00000568158 CTSEP14091 401 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 BPIP17213 487 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 TPH1P17752 444 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 MSNP26038 577 aaKnown RBP12.94□□□□□ -0.34
CNOT1-213ENST00000568158 TEAD1P28347 426 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 RPL22P35268 128 aaKnown RBP12.94□□□□□ -0.34
CNOT1-213ENST00000568158 DEFB133Q30KQ1 61 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 HENMT1Q5T8I9 393 aaKnown RBP12.94□□□□□ -0.34
CNOT1-213ENST00000568158 DRICH1Q6PGQ1 229 aaPredicted RBP12.94□□□□□ -0.34
CNOT1-213ENST00000568158 DOK6Q6PKX4 331 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 ERMP1Q7Z2K6 904 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms