RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 ADAMTSL4Q6UY14 1074 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 RAB11FIP2Q7L804 512 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 SPRED1Q7Z699 444 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 VSIG1Q86XK7 387 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 CCDC13Q8IYE1 715 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 NRSN1Q8IZ57 195 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 FBXO39Q8N4B4 442 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.11■□□□□ 0.81
CLN6-207ENST00000566347 CCNYQ8ND76 341 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 ARRDC2Q8TBH0 407 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 RNF157Q96PX1 679 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 FOXP3Q9BZS1 431 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 ABCG8Q9H221 673 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 SUDS3Q9H7L9 328 aaPredicted RBP20.11■□□□□ 0.81
CLN6-207ENST00000566347 ABHD10Q9NUJ1 306 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 DTLQ9NZJ0 730 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 CHKBQ9Y259 395 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 PMS2P1A4D2B8 440 aa20.1■□□□□ 0.81
CLN6-207ENST00000566347 ATXN7O15265 892 aaPredicted RBP20.1■□□□□ 0.81
CLN6-207ENST00000566347 ZW10O43264 779 aa20.1■□□□□ 0.81
CLN6-207ENST00000566347 FUCA1P04066 466 aa20.1■□□□□ 0.81
CLN6-207ENST00000566347 HLA-DQB2P05538 268 aa20.1■□□□□ 0.81
CLN6-207ENST00000566347 STC1P52823 247 aa20.1■□□□□ 0.81
CLN6-207ENST00000566347 C17orf82Q86X59 251 aaPredicted RBP20.1■□□□□ 0.81
CLN6-207ENST00000566347 NRROSQ86YC3 692 aa20.1■□□□□ 0.81
CLN6-207ENST00000566347 VSTM4Q8IW00 320 aa20.1■□□□□ 0.81
CLN6-207ENST00000566347 RHOT2Q8IXI1 618 aa20.1■□□□□ 0.81
CLN6-207ENST00000566347 SLC35G2Q8TBE7 412 aa20.1■□□□□ 0.81
CLN6-207ENST00000566347 ZDHHC1Q8WTX9 485 aa20.1■□□□□ 0.81
CLN6-207ENST00000566347 RAPGEF5Q92565 580 aa20.1■□□□□ 0.81
CLN6-207ENST00000566347 TMEM159Q96B96 161 aa20.1■□□□□ 0.81
CLN6-207ENST00000566347 CCDC42Q96M95 316 aa20.1■□□□□ 0.81
CLN6-207ENST00000566347 CDH19Q9H159 772 aa20.1■□□□□ 0.81
CLN6-207ENST00000566347 PCDH9Q9HC56 1237 aa20.1■□□□□ 0.81
CLN6-207ENST00000566347 SPATS2LQ9NUQ6 558 aaKnown RBP20.1■□□□□ 0.81
CLN6-207ENST00000566347 TAAR2Q9P1P5 351 aa20.1■□□□□ 0.81
CLN6-207ENST00000566347 CD84Q9UIB8 345 aa20.1■□□□□ 0.81
CLN6-207ENST00000566347 MGAQ8IWI9 3026 aa20.09■□□□□ 0.81
CLN6-207ENST00000566347 LRRD1A4D1F6 860 aa20.09■□□□□ 0.81
CLN6-207ENST00000566347 SOD1P00441 154 aa20.09■□□□□ 0.81
CLN6-207ENST00000566347 FGF1P05230 155 aa20.09■□□□□ 0.81
CLN6-207ENST00000566347 UGT1A5P35504 534 aa20.09■□□□□ 0.81
CLN6-207ENST00000566347 PPIDQ08752 370 aaKnown RBP20.09■□□□□ 0.81
CLN6-207ENST00000566347 NIPAL4Q0D2K0 466 aa20.09■□□□□ 0.81
CLN6-207ENST00000566347 SLC10A2Q12908 348 aaPredicted RBP20.09■□□□□ 0.81
CLN6-207ENST00000566347 IHHQ14623 411 aa20.09■□□□□ 0.81
CLN6-207ENST00000566347 SFTPA2Q8IWL1 248 aa20.09■□□□□ 0.81
CLN6-207ENST00000566347 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.09■□□□□ 0.81
CLN6-207ENST00000566347 SCARF2Q96GP6 870 aaPredicted RBP20.09■□□□□ 0.81
CLN6-207ENST00000566347 LYSMD1Q96S90 227 aa20.09■□□□□ 0.81
CLN6-207ENST00000566347 ANP32EQ9BTT0 268 aa20.09■□□□□ 0.81
CLN6-207ENST00000566347 PCDHGA7Q9Y5G6 932 aa20.09■□□□□ 0.81
CLN6-207ENST00000566347 A0A0U1RQS6 177 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 RHPN2P1A8MT19 583 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 MFAP3LO75121 409 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 MTA2O94776 668 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 PRLP01236 227 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 ADCY8P40145 1251 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 POLD2P49005 469 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 CTBSQ01459 385 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 ZFP36L1Q07352 338 aaKnown RBP20.08■□□□□ 0.81
CLN6-207ENST00000566347 CLPPQ16740 277 aaPredicted RBP20.08■□□□□ 0.81
CLN6-207ENST00000566347 DOK6Q6PKX4 331 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 SLC30A9Q6PML9 568 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 RFLNAQ6ZTI6 216 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 ZNF438Q7Z4V0 828 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 LPCAT1Q8NF37 534 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 EXD1Q8NHP7 514 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 SLC39A7Q92504 469 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 SCAMP4Q969E2 229 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 SMIM14Q96QK8 99 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 OR2M4Q96R27 311 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 MAK16Q9BXY0 300 aaKnown RBP20.08■□□□□ 0.81
CLN6-207ENST00000566347 TSPY26PQ9H489 355 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 NHEJ1Q9H9Q4 299 aaPredicted RBP20.08■□□□□ 0.81
CLN6-207ENST00000566347 ATXN7L1Q9ULK2 861 aaPredicted RBP20.08■□□□□ 0.81
CLN6-207ENST00000566347 SSUH2Q9Y2M2 353 aa20.08■□□□□ 0.81
CLN6-207ENST00000566347 JCHAINP01591 159 aa20.07■□□□□ 0.8
CLN6-207ENST00000566347 JMJD7P0C870 316 aa20.07■□□□□ 0.8
CLN6-207ENST00000566347 ZFXP17010 805 aaPredicted RBP20.07■□□□□ 0.8
CLN6-207ENST00000566347 AK4P27144 223 aaPredicted RBP20.07■□□□□ 0.8
CLN6-207ENST00000566347 MAZP56270 477 aaKnown RBP20.07■□□□□ 0.8
CLN6-207ENST00000566347 IFI35P80217 286 aaPredicted RBP20.07■□□□□ 0.8
CLN6-207ENST00000566347 B4GALNT1Q00973 533 aa20.07■□□□□ 0.8
CLN6-207ENST00000566347 BIRC2Q13490 618 aa20.07■□□□□ 0.8
CLN6-207ENST00000566347 NR1D2Q14995 579 aa20.07■□□□□ 0.8
CLN6-207ENST00000566347 ODF2Q5BJF6 829 aa20.07■□□□□ 0.8
CLN6-207ENST00000566347 LRRC38Q5VT99 294 aa20.07■□□□□ 0.8
CLN6-207ENST00000566347 SLC9A4Q6AI14 798 aa20.07■□□□□ 0.8
CLN6-207ENST00000566347 PLD5Q8N7P1 536 aa20.07■□□□□ 0.8
CLN6-207ENST00000566347 LRRN4Q8WUT4 740 aa20.07■□□□□ 0.8
CLN6-207ENST00000566347 PTCD2Q8WV60 388 aaKnown RBP20.07■□□□□ 0.8
CLN6-207ENST00000566347 CHP1Q99653 195 aa20.07■□□□□ 0.8
CLN6-207ENST00000566347 ADGRE3Q9BY15 652 aa20.07■□□□□ 0.8
CLN6-207ENST00000566347 CPNE5Q9HCH3 593 aa20.07■□□□□ 0.8
CLN6-207ENST00000566347 SPTLC3Q9NUV7 552 aa20.07■□□□□ 0.8
CLN6-207ENST00000566347 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.07■□□□□ 0.8
CLN6-207ENST00000566347 LOXL2Q9Y4K0 774 aa20.07■□□□□ 0.8
CLN6-207ENST00000566347 HEY1Q9Y5J3 304 aa20.07■□□□□ 0.8
CLN6-207ENST00000566347 KALRNO60229 2985 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms