RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 ZRANB3Q5FWF4 1079 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 ZDHHC20Q5W0Z9 365 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 FAM151BQ6UXP7 276 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 GALNT7Q86SF2 657 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 ZC3HC1Q86WB0 502 aaKnown RBP18.69■□□□□ 0.58
COMMD4-213ENST00000565834 ATXN7L3BQ96GX2 97 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 SHDQ96IW2 340 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 VPS39Q96JC1 886 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 MCMBPQ9BTE3 642 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 FBXO6Q9NRD1 293 aaPredicted RBP18.69■□□□□ 0.58
COMMD4-213ENST00000565834 MMP17Q9ULZ9 603 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 ACTL7BQ9Y614 415 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 GLYATL1P3A0A0U1RQE8 302 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 A0A1W2PPM1 405 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 HMX2A2RU54 273 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 AREL1O15033 823 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 SPINT1O43278 529 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 PRAMEF1O95521 474 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 ELFN1P0C7U0 828 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 GABRB3P28472 473 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 PMLP29590 882 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 HPDP32754 393 aaPredicted RBP18.69■□□□□ 0.58
COMMD4-213ENST00000565834 DRD3P35462 400 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 ABCG1P45844 678 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 LEPRP48357 1165 aaKnown RBP18.69■□□□□ 0.58
COMMD4-213ENST00000565834 SPINT3P49223 89 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 CACNG1Q06432 222 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 LDB1Q86U70 411 aaPredicted RBP18.69■□□□□ 0.58
COMMD4-213ENST00000565834 AADATQ8N5Z0 425 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 SCG3Q8WXD2 468 aaKnown RBP18.69■□□□□ 0.58
COMMD4-213ENST00000565834 MKRN2Q9H000 416 aaKnown RBP18.69■□□□□ 0.58
COMMD4-213ENST00000565834 IL26Q9NPH9 171 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 PLXNA2O75051 1894 aa18.68■□□□□ 0.58
COMMD4-213ENST00000565834 H0Y858 1186 aa18.68■□□□□ 0.58
COMMD4-213ENST00000565834 NEMP1O14524 444 aa18.68■□□□□ 0.58
COMMD4-213ENST00000565834 SRP72O76094 671 aaKnown RBP18.68■□□□□ 0.58
COMMD4-213ENST00000565834 PRSS56P0CW18 603 aa18.68■□□□□ 0.58
COMMD4-213ENST00000565834 NR1D1P20393 614 aa18.68■□□□□ 0.58
COMMD4-213ENST00000565834 ITGALP20701 1170 aa18.68■□□□□ 0.58
COMMD4-213ENST00000565834 CCDC15Q0P6D6 951 aa18.68■□□□□ 0.58
COMMD4-213ENST00000565834 DNAJC3Q13217 504 aa18.68■□□□□ 0.58
COMMD4-213ENST00000565834 LRRC32Q14392 662 aa18.68■□□□□ 0.58
COMMD4-213ENST00000565834 SEMA3AQ14563 771 aa18.68■□□□□ 0.58
COMMD4-213ENST00000565834 TYSND1Q2T9J0 566 aa18.68■□□□□ 0.58
COMMD4-213ENST00000565834 AARS2Q5JTZ9 985 aaKnown RBP18.68■□□□□ 0.58
COMMD4-213ENST00000565834 PIP5KL1Q5T9C9 394 aa18.68■□□□□ 0.58
COMMD4-213ENST00000565834 LIPIQ6XZB0 460 aa18.68■□□□□ 0.58
COMMD4-213ENST00000565834 HSD11B1LQ7Z5J1 315 aa18.68■□□□□ 0.58
COMMD4-213ENST00000565834 TMPRSS6Q8IU80 811 aa18.68■□□□□ 0.58
COMMD4-213ENST00000565834 GPR26Q8NDV2 337 aa18.68■□□□□ 0.58
COMMD4-213ENST00000565834 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.68■□□□□ 0.58
COMMD4-213ENST00000565834 PLEKHG4BQ96PX9 1271 aa18.68■□□□□ 0.58
COMMD4-213ENST00000565834 WRAP53Q9BUR4 548 aaKnown RBP18.68■□□□□ 0.58
COMMD4-213ENST00000565834 CD248Q9HCU0 757 aa18.68■□□□□ 0.58
COMMD4-213ENST00000565834 RAD18Q9NS91 495 aa18.68■□□□□ 0.58
COMMD4-213ENST00000565834 KRBA1A5PL33 1030 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 GOLGA8CPA6NN73 597 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 PSMD11O00231 422 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 GAPDHSO14556 408 aaPredicted RBP18.67■□□□□ 0.58
COMMD4-213ENST00000565834 HAUS5O94927 633 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 S1PR4O95977 384 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 DNTTP04053 509 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 CHRNB1P11230 501 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 GLIPR1L2Q4G1C9 344 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 PSAPL1Q6NUJ1 521 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 TAS2R42Q7RTR8 314 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 UBALD2Q8IYN6 164 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 ZNF687Q8N1G0 1237 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 SYNPOQ8N3V7 929 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 HDDC3Q8N4P3 179 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 PNPLA1Q8N8W4 532 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 FAM76AQ8TAV0 307 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 SMC6Q96SB8 1091 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 TCF12Q99081 682 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 FAM96AQ9H5X1 160 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 MTO1Q9Y2Z2 717 aaKnown RBP18.67■□□□□ 0.58
COMMD4-213ENST00000565834 TRIOO75962 3097 aa18.67■□□□□ 0.58
COMMD4-213ENST00000565834 A0A1W2PP55 124 aa18.66■□□□□ 0.58
COMMD4-213ENST00000565834 PFDN6O15212 129 aa18.66■□□□□ 0.58
COMMD4-213ENST00000565834 TARSP26639 723 aaKnown RBP18.66■□□□□ 0.58
COMMD4-213ENST00000565834 TTPAP49638 278 aa18.66■□□□□ 0.58
COMMD4-213ENST00000565834 LIG3P49916 1009 aa18.66■□□□□ 0.58
COMMD4-213ENST00000565834 CDKN1CP49918 316 aaPredicted RBP18.66■□□□□ 0.58
COMMD4-213ENST00000565834 STARD6P59095 220 aa18.66■□□□□ 0.58
COMMD4-213ENST00000565834 ILF2Q12905 390 aaKnown RBP18.66■□□□□ 0.58
COMMD4-213ENST00000565834 NFATC2Q13469 925 aa18.66■□□□□ 0.58
COMMD4-213ENST00000565834 UBXN2BQ14CS0 331 aa18.66■□□□□ 0.58
COMMD4-213ENST00000565834 ACOX1Q15067 660 aa18.66■□□□□ 0.58
COMMD4-213ENST00000565834 TMEM52BQ4KMG9 183 aa18.66■□□□□ 0.58
COMMD4-213ENST00000565834 ZNF789Q5FWF6 425 aa18.66■□□□□ 0.58
COMMD4-213ENST00000565834 AGBL4Q5VU57 503 aa18.66■□□□□ 0.58
COMMD4-213ENST00000565834 CNSTQ6PJW8 725 aa18.66■□□□□ 0.58
COMMD4-213ENST00000565834 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.66■□□□□ 0.58
COMMD4-213ENST00000565834 TIFABQ6ZNK6 161 aa18.66■□□□□ 0.58
COMMD4-213ENST00000565834 Q6ZS52 159 aa18.66■□□□□ 0.58
COMMD4-213ENST00000565834 RFLNAQ6ZTI6 216 aa18.66■□□□□ 0.58
COMMD4-213ENST00000565834 SNX20Q7Z614 316 aa18.66■□□□□ 0.58
COMMD4-213ENST00000565834 PIANPQ8IYJ0 282 aa18.66■□□□□ 0.58
COMMD4-213ENST00000565834 C4orf33Q8N1A6 199 aa18.66■□□□□ 0.58
COMMD4-213ENST00000565834 DCLK2Q8N568 766 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms