RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 F9P00740 461 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 HOXD9P28356 352 aaPredicted RBP6.24□□□□□ -1.41
UBFD1-204ENST00000565634 CCR1P32246 355 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 CD70P32970 193 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 PCK1P35558 622 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 ACVRL1P37023 503 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 DPYSQ14117 519 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 DPYSL3Q14195 570 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 MAP7Q14244 749 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 CLCA4Q14CN2 919 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 PPP2R5EQ16537 467 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 ARL13BQ3SXY8 428 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 PPP6R3Q5H9R7 873 aaPredicted RBP6.24□□□□□ -1.41
UBFD1-204ENST00000565634 RPS26P11Q5JNZ5 115 aaPredicted RBP6.24□□□□□ -1.41
UBFD1-204ENST00000565634 GRAMD4Q6IC98 578 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 C6orf15Q6UXA7 325 aaPredicted RBP6.24□□□□□ -1.41
UBFD1-204ENST00000565634 CLEC18BQ6UXF7 455 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 USP53Q70EK8 1073 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 NLRP14Q86W24 1093 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 WFDC3Q8IUB2 231 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 FAM26EQ8N5C1 309 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 RNF10Q8N5U6 811 aaKnown RBP6.24□□□□□ -1.41
UBFD1-204ENST00000565634 CLEC18CQ8NCF0 446 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 CADM4Q8NFZ8 388 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 FAM71BQ8TC56 605 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 SAP25Q8TEE9 199 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 COG1Q8WTW3 980 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 TMA16Q96EY4 203 aaKnown RBP6.24□□□□□ -1.41
UBFD1-204ENST00000565634 ALG14Q96F25 216 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 HES6Q96HZ4 224 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 CELF6Q96J87 481 aaKnown RBP6.24□□□□□ -1.41
UBFD1-204ENST00000565634 C1orf74Q96LT6 269 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 NSMCE3Q96MG7 304 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 SLC6A18Q96N87 628 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 SERPINB11Q96P15 392 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 HAPLN3Q96S86 360 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 KRTAP4-7Q9BYR0 210 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 MTG2Q9H4K7 406 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 EBF2Q9HAK2 575 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 ASCL3Q9NQ33 180 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 KCND1Q9NSA2 647 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 RRN3Q9NYV6 651 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 DNAI1Q9UI46 699 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 ZMYM5Q9UJ78 669 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 AP4E1Q9UPM8 1137 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 SATB2Q9UPW6 733 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 R3HDM2Q9Y2K5 976 aaKnown RBP6.24□□□□□ -1.41
UBFD1-204ENST00000565634 SH3BP1Q9Y3L3 701 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 PCDHA3Q9Y5H8 950 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 COL27A1Q8IZC6 1860 aaPredicted RBP6.24□□□□□ -1.41
UBFD1-204ENST00000565634 IGLV3-10A0A075B6K4 115 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.23□□□□□ -1.41
UBFD1-204ENST00000565634 KRT86O43790 486 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 SPOPO43791 374 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 PRPSAP2O60256 369 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 SNAP91O60641 907 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 DIAPH2O60879 1101 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 CSO75390 466 aaKnown RBP6.23□□□□□ -1.41
UBFD1-204ENST00000565634 ASMTLO95671 621 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 CD160O95971 181 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 MT-CO1P00395 513 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 PENKP01210 267 aaPredicted RBP6.23□□□□□ -1.41
UBFD1-204ENST00000565634 ACADMP11310 421 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 TYRP14679 529 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 PFKLP17858 780 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 ERCC2P18074 760 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 CDKN2BP42772 138 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 HARS2P49590 506 aaKnown RBP6.23□□□□□ -1.41
UBFD1-204ENST00000565634 CDH6P55285 790 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 C21orf59P57076 290 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 GNG11P61952 73 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 IHHQ14623 411 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 FXNQ16595 210 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 TAZQ16635 292 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 GEN1Q17RS7 908 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 C5orf22Q49AR2 442 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 BOLA3Q53S33 107 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 ANKRD20A8PQ5CZ79 823 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 BRMS1LQ5PSV4 323 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 KAZNQ674X7 775 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 CXorf57Q6NSI4 855 aaKnown RBP6.23□□□□□ -1.41
UBFD1-204ENST00000565634 C11orf63Q6NUN7 778 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 PPP1R2P3Q6NXS1 205 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 SYT10Q6XYQ8 523 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 PEX26Q7Z412 305 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 TRMT11Q7Z4G4 463 aaKnown RBP6.23□□□□□ -1.41
UBFD1-204ENST00000565634 TFAP2DQ7Z6R9 452 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 PRUNE1Q86TP1 453 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 CHSY1Q86X52 802 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 SULF2Q8IWU5 870 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 ARHGAP12Q8IWW6 846 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 UNC45BQ8IWX7 931 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 CARNMT1Q8N4J0 409 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 NPWQ8N729 165 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 POU5F2Q8N7G0 328 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 ATP6V0D2Q8N8Y2 350 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 DCBLD1Q8N8Z6 715 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 KCTD6Q8NC69 237 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 OR7D4Q8NG98 312 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 SNRNP27Q8WVK2 155 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms