RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 RBM22Q9NW64 420 aaKnown RBP eCLIP23.67■■□□□ 1.38
RAB40C-209ENST00000565511 PISDQ9UG56 409 aa23.67■■□□□ 1.38
RAB40C-209ENST00000565511 LOXL2Q9Y4K0 774 aa23.67■■□□□ 1.38
RAB40C-209ENST00000565511 TTLL3Q9Y4R7 772 aa23.67■■□□□ 1.38
RAB40C-209ENST00000565511 TK2O00142 265 aa23.66■■□□□ 1.38
RAB40C-209ENST00000565511 PDE2AO00408 941 aaPredicted RBP23.66■■□□□ 1.38
RAB40C-209ENST00000565511 NUDT21O43809 227 aaKnown RBP23.66■■□□□ 1.38
RAB40C-209ENST00000565511 ECEL1O95672 775 aa23.66■■□□□ 1.38
RAB40C-209ENST00000565511 PNLIPP16233 465 aa23.66■■□□□ 1.38
RAB40C-209ENST00000565511 ADCY8P40145 1251 aa23.66■■□□□ 1.38
RAB40C-209ENST00000565511 MLLT3P42568 568 aaPredicted RBP23.66■■□□□ 1.38
RAB40C-209ENST00000565511 STC1P52823 247 aa23.66■■□□□ 1.38
RAB40C-209ENST00000565511 UCNP55089 124 aa23.66■■□□□ 1.38
RAB40C-209ENST00000565511 DPTQ07507 201 aa23.66■■□□□ 1.38
RAB40C-209ENST00000565511 VAC14Q08AM6 782 aa23.66■■□□□ 1.38
RAB40C-209ENST00000565511 TGIF1Q15583 401 aa23.66■■□□□ 1.38
RAB40C-209ENST00000565511 TSR1Q2NL82 804 aaKnown RBP23.66■■□□□ 1.38
RAB40C-209ENST00000565511 ZSCAN23Q3MJ62 389 aa23.66■■□□□ 1.38
RAB40C-209ENST00000565511 ZNF438Q7Z4V0 828 aa23.66■■□□□ 1.38
RAB40C-209ENST00000565511 LRRC49Q8IUZ0 686 aa23.66■■□□□ 1.38
RAB40C-209ENST00000565511 ZNF843Q8N446 348 aa23.66■■□□□ 1.38
RAB40C-209ENST00000565511 KCTD6Q8NC69 237 aa23.66■■□□□ 1.38
RAB40C-209ENST00000565511 SNRNP27Q8WVK2 155 aaKnown RBP23.66■■□□□ 1.38
RAB40C-209ENST00000565511 TTC9Q92623 222 aa23.66■■□□□ 1.38
RAB40C-209ENST00000565511 TSGA13Q96PP4 275 aa23.66■■□□□ 1.38
RAB40C-209ENST00000565511 RDH14Q9HBH5 336 aa23.66■■□□□ 1.38
RAB40C-209ENST00000565511 TRNAU1APQ9NX07 287 aaKnown RBP23.66■■□□□ 1.38
RAB40C-209ENST00000565511 COL6A6A6NMZ7 2263 aa23.66■■□□□ 1.38
RAB40C-209ENST00000565511 CAPN8A6NHC0 703 aa23.65■■□□□ 1.38
RAB40C-209ENST00000565511 EFSO43281 561 aa23.65■■□□□ 1.38
RAB40C-209ENST00000565511 IVLP07476 585 aa23.65■■□□□ 1.38
RAB40C-209ENST00000565511 MMP2P08253 660 aa23.65■■□□□ 1.38
RAB40C-209ENST00000565511 GPR1P46091 355 aa23.65■■□□□ 1.38
RAB40C-209ENST00000565511 IFI16Q16666 785 aaKnown RBP23.65■■□□□ 1.38
RAB40C-209ENST00000565511 KIAA1614Q5VZ46 1190 aa23.65■■□□□ 1.38
RAB40C-209ENST00000565511 ADAMTSL4Q6UY14 1074 aa23.65■■□□□ 1.38
RAB40C-209ENST00000565511 JAMLQ86YT9 394 aa23.65■■□□□ 1.38
RAB40C-209ENST00000565511 NAGSQ8N159 534 aa23.65■■□□□ 1.38
RAB40C-209ENST00000565511 AP2M1Q96CW1 435 aa23.65■■□□□ 1.38
RAB40C-209ENST00000565511 SCARF2Q96GP6 870 aaPredicted RBP23.65■■□□□ 1.38
RAB40C-209ENST00000565511 TMEM74Q96NL1 305 aa23.65■■□□□ 1.38
RAB40C-209ENST00000565511 WDR24Q96S15 920 aa23.65■■□□□ 1.38
RAB40C-209ENST00000565511 NUDT22Q9BRQ3 303 aa23.65■■□□□ 1.38
RAB40C-209ENST00000565511 GSDMCQ9BYG8 508 aa23.65■■□□□ 1.38
RAB40C-209ENST00000565511 STRADBQ9C0K7 418 aa23.65■■□□□ 1.38
RAB40C-209ENST00000565511 DTLQ9NZJ0 730 aa23.65■■□□□ 1.38
RAB40C-209ENST00000565511 UVRAGQ9P2Y5 699 aa23.65■■□□□ 1.38
RAB40C-209ENST00000565511 PCDHGA7Q9Y5G6 932 aa23.65■■□□□ 1.38
RAB40C-209ENST00000565511 ERVH48-1M5A8F1 160 aa23.64■■□□□ 1.37
RAB40C-209ENST00000565511 CCNCP24863 283 aa23.64■■□□□ 1.37
RAB40C-209ENST00000565511 ILF3Q12906 894 aaKnown RBP eCLIP23.64■■□□□ 1.37
RAB40C-209ENST00000565511 EIF3IQ13347 325 aaKnown RBP23.64■■□□□ 1.37
RAB40C-209ENST00000565511 C16orf72Q14CZ0 275 aa23.64■■□□□ 1.37
RAB40C-209ENST00000565511 SLC18A3Q16572 532 aa23.64■■□□□ 1.37
RAB40C-209ENST00000565511 AMZ1Q400G9 498 aa23.64■■□□□ 1.37
RAB40C-209ENST00000565511 ZNF574Q6ZN55 896 aaPredicted RBP23.64■■□□□ 1.37
RAB40C-209ENST00000565511 MARK2Q7KZI7 788 aaKnown RBP23.64■■□□□ 1.37
RAB40C-209ENST00000565511 LPCAT1Q8NF37 534 aa23.64■■□□□ 1.37
RAB40C-209ENST00000565511 KIAA1524Q8TCG1 905 aa23.64■■□□□ 1.37
RAB40C-209ENST00000565511 FATE1Q969F0 183 aa23.64■■□□□ 1.37
RAB40C-209ENST00000565511 DNAJC7Q99615 494 aa23.64■■□□□ 1.37
RAB40C-209ENST00000565511 RIOK2Q9BVS4 552 aaKnown RBP23.64■■□□□ 1.37
RAB40C-209ENST00000565511 KCTD5Q9NXV2 234 aa23.64■■□□□ 1.37
RAB40C-209ENST00000565511 FOXJ2Q9P0K8 574 aa23.64■■□□□ 1.37
RAB40C-209ENST00000565511 OAS3Q9Y6K5 1087 aaKnown RBP23.64■■□□□ 1.37
RAB40C-209ENST00000565511 PIEZO2Q9H5I5 2752 aa23.64■■□□□ 1.37
RAB40C-209ENST00000565511 K7ENP7 123 aa23.63■■□□□ 1.37
RAB40C-209ENST00000565511 CLDN7O95471 211 aa23.63■■□□□ 1.37
RAB40C-209ENST00000565511 H2AFZP0C0S5 128 aa23.63■■□□□ 1.37
RAB40C-209ENST00000565511 ZBTB17Q13105 803 aa23.63■■□□□ 1.37
RAB40C-209ENST00000565511 NR1D2Q14995 579 aa23.63■■□□□ 1.37
RAB40C-209ENST00000565511 PDK2Q15119 407 aa23.63■■□□□ 1.37
RAB40C-209ENST00000565511 SDK2Q58EX2 2172 aa23.63■■□□□ 1.37
RAB40C-209ENST00000565511 INO80CQ6PI98 192 aaPredicted RBP23.63■■□□□ 1.37
RAB40C-209ENST00000565511 H2AFVQ71UI9 128 aa23.63■■□□□ 1.37
RAB40C-209ENST00000565511 PLD5Q8N7P1 536 aa23.63■■□□□ 1.37
RAB40C-209ENST00000565511 LSM14AQ8ND56 463 aaKnown RBP23.63■■□□□ 1.37
RAB40C-209ENST00000565511 BRD8Q9H0E9 1235 aa23.63■■□□□ 1.37
RAB40C-209ENST00000565511 PRAMEF33A0A0G2JMD5 474 aa23.62■■□□□ 1.37
RAB40C-209ENST00000565511 C3orf70A6NLC5 250 aaPredicted RBP23.62■■□□□ 1.37
RAB40C-209ENST00000565511 PPM1DO15297 605 aa23.62■■□□□ 1.37
RAB40C-209ENST00000565511 INPP4BO15327 924 aa23.62■■□□□ 1.37
RAB40C-209ENST00000565511 PRAMEF10O60809 474 aa23.62■■□□□ 1.37
RAB40C-209ENST00000565511 EML2O95834 649 aa23.62■■□□□ 1.37
RAB40C-209ENST00000565511 KDELR1P24390 212 aa23.62■■□□□ 1.37
RAB40C-209ENST00000565511 NFKBIAP25963 317 aa23.62■■□□□ 1.37
RAB40C-209ENST00000565511 C19orf57Q0VDD7 668 aa23.62■■□□□ 1.37
RAB40C-209ENST00000565511 MAP9Q49MG5 647 aa23.62■■□□□ 1.37
RAB40C-209ENST00000565511 PHF19Q5T6S3 580 aa23.62■■□□□ 1.37
RAB40C-209ENST00000565511 TIGD7Q6NT04 549 aaPredicted RBP23.62■■□□□ 1.37
RAB40C-209ENST00000565511 USP53Q70EK8 1073 aa23.62■■□□□ 1.37
RAB40C-209ENST00000565511 ZNF765Q7L2R6 523 aa23.62■■□□□ 1.37
RAB40C-209ENST00000565511 CNTD1Q8N815 330 aa23.62■■□□□ 1.37
RAB40C-209ENST00000565511 CTNNBL1Q8WYA6 563 aaPredicted RBP23.62■■□□□ 1.37
RAB40C-209ENST00000565511 PMEPA1Q969W9 287 aa23.62■■□□□ 1.37
RAB40C-209ENST00000565511 HDAC11Q96DB2 347 aa23.62■■□□□ 1.37
RAB40C-209ENST00000565511 COX14Q96I36 57 aa23.62■■□□□ 1.37
RAB40C-209ENST00000565511 OR2M4Q96R27 311 aa23.62■■□□□ 1.37
RAB40C-209ENST00000565511 CHP1Q99653 195 aa23.62■■□□□ 1.37
RAB40C-209ENST00000565511 CEP41Q9BYV8 373 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms