RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ZNF165P49910 485 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 TPM4P67936 248 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 MYL5Q02045 173 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 DEUP1Q05D60 604 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 PDCLQ13371 301 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 ANO6Q4KMQ2 910 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 INO80DQ53TQ3 878 aaPredicted RBP9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 CPZQ66K79 652 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 BRAT1Q6PJG6 821 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 LEKR1Q6ZMV7 388 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 SYVN1Q86TM6 617 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 TRIM59Q8IWR1 403 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 ST6GALNAC3Q8NDV1 305 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 CT55Q8WUE5 264 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 ZNF606Q8WXB4 792 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 ZNF641Q96N77 438 aaPredicted RBP9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 EPB41L1Q9H4G0 881 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 STN1Q9H668 368 aaKnown RBP9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 ANLNQ9NQW6 1124 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 KCTD5Q9NXV2 234 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 C5AR2Q9P296 337 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 ZNF212Q9UDV6 495 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 LNPEPQ9UIQ6 1025 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 STAP1Q9ULZ2 295 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 FARSAQ9Y285 508 aaKnown RBP9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 B3GNT3Q9Y2A9 372 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 ATP8A1Q9Y2Q0 1164 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 KLF2Q9Y5W3 355 aaPredicted RBP9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 DNHD1Q96M86 4753 aa9.01□□□□□ -0.97
VPS9D1-205ENST00000565452 POLEQ07864 2286 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 A0A1B0GUH1 482 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 A6NL46 340 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 RASA4BC9J798 803 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 ZNF185O15231 689 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 RASA4O43374 803 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 SPAG6O75602 509 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 FUCA1P04066 466 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 PLEKP08567 350 aaPredicted RBP9□□□□□ -0.97
VPS9D1-205ENST00000565452 ANKRD34CP0C6C1 535 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 KRT5P13647 590 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 BPIP17213 487 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 CDK11BP21127 795 aaKnown RBP9□□□□□ -0.97
VPS9D1-205ENST00000565452 MMP12P39900 470 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 ACTR1BP42025 376 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 EPHA4P54764 986 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 ACTR1AP61163 376 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 RHOAP61586 193 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 POLR2LP62875 67 aaKnown RBP9□□□□□ -0.97
VPS9D1-205ENST00000565452 PDE1BQ01064 536 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 SLC6A3Q01959 620 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 HHEXQ03014 270 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 CHCHD2P9Q5T1J5 151 aaPredicted RBP9□□□□□ -0.97
VPS9D1-205ENST00000565452 CYB5D1Q6P9G0 228 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 LIPIQ6XZB0 460 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 RRAGAQ7L523 313 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 ZNF761Q86XN6 746 aaPredicted RBP9□□□□□ -0.97
VPS9D1-205ENST00000565452 ZNF354CQ86Y25 554 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 MMP21Q8N119 569 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 FDCSPQ8NFU4 85 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 SLC35C1Q96A29 364 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 PGAP3Q96FM1 320 aaPredicted RBP9□□□□□ -0.97
VPS9D1-205ENST00000565452 FAM81BQ96LP2 452 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 OR6C1Q96RD1 312 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 NPY6RQ99463 290 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 SMAD5Q99717 465 aaKnown RBP9□□□□□ -0.97
VPS9D1-205ENST00000565452 BARD1Q99728 777 aaKnown RBP9□□□□□ -0.97
VPS9D1-205ENST00000565452 ILKAPQ9H0C8 392 aaPredicted RBP9□□□□□ -0.97
VPS9D1-205ENST00000565452 GPR83Q9NYM4 423 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9□□□□□ -0.97
VPS9D1-205ENST00000565452 SUFUQ9UMX1 484 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 OSGIN2Q9Y236 505 aa9□□□□□ -0.97
VPS9D1-205ENST00000565452 TSPAN11A1L157 253 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 GTPBP10A4D1E9 387 aaKnown RBP8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 GOLGA6L3A6NEY3 463 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 I6L893 689 aaPredicted RBP8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 TOX3O15405 576 aaPredicted RBP8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 INSIG1O15503 277 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 KLHL41O60662 606 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 DAB1O75553 588 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 FAM155BO75949 473 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 TMCC1O94876 653 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 MAP3K6O95382 1288 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 NADKO95544 446 aaPredicted RBP8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 IVLP07476 585 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 ELFN1P0C7U0 828 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 FGF5P12034 268 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 CD1EP15812 388 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 MAPK9P45984 424 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 MTIF2P46199 727 aaKnown RBP8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 GLRBP48167 497 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 MAPKAPK2P49137 400 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 FMO5P49326 533 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 GCNT1Q02742 428 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 NFATC2Q13469 925 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 ACOX1Q15067 660 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 MAN2A1Q16706 1144 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 VWA2Q5GFL6 755 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms