RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 BPTFQ12830 3046 aa19.5■□□□□ 0.71
CLN6-205ENST00000564846 NPIPB15A6NHN6 443 aaPredicted RBP19.5■□□□□ 0.71
CLN6-205ENST00000564846 WISP3O95389 354 aaPredicted RBP19.5■□□□□ 0.71
CLN6-205ENST00000564846 BMP1P13497 986 aa19.5■□□□□ 0.71
CLN6-205ENST00000564846 OCRLQ01968 901 aa19.5■□□□□ 0.71
CLN6-205ENST00000564846 RUNX3Q13761 415 aa19.5■□□□□ 0.71
CLN6-205ENST00000564846 AGAP9Q5VTM2 703 aa19.5■□□□□ 0.71
CLN6-205ENST00000564846 LRRC8EQ6NSJ5 796 aa19.5■□□□□ 0.71
CLN6-205ENST00000564846 PSAPL1Q6NUJ1 521 aa19.5■□□□□ 0.71
CLN6-205ENST00000564846 CRTC1Q6UUV9 634 aa19.5■□□□□ 0.71
CLN6-205ENST00000564846 YTHDF3Q7Z739 585 aaKnown RBP19.5■□□□□ 0.71
CLN6-205ENST00000564846 STK40Q8N2I9 435 aa19.5■□□□□ 0.71
CLN6-205ENST00000564846 TMEM151AQ8N4L1 468 aa19.5■□□□□ 0.71
CLN6-205ENST00000564846 GRIN3AQ8TCU5 1115 aa19.5■□□□□ 0.71
CLN6-205ENST00000564846 ZNF398Q8TD17 642 aa19.5■□□□□ 0.71
CLN6-205ENST00000564846 ELSPBP1Q96BH3 223 aa19.5■□□□□ 0.71
CLN6-205ENST00000564846 NXNL1Q96CM4 212 aa19.5■□□□□ 0.71
CLN6-205ENST00000564846 SCYL1Q96KG9 808 aa19.5■□□□□ 0.71
CLN6-205ENST00000564846 IL36AQ9UHA7 158 aa19.5■□□□□ 0.71
CLN6-205ENST00000564846 WASF2Q9Y6W5 498 aa19.5■□□□□ 0.71
CLN6-205ENST00000564846 UBA6A0AVT1 1052 aaPredicted RBP19.49■□□□□ 0.71
CLN6-205ENST00000564846 PRRT4C9JH25 899 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 DNAJC6O75061 913 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 LTA4HP09960 611 aaKnown RBP19.49■□□□□ 0.71
CLN6-205ENST00000564846 MYL2P10916 166 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 RALBP11234 206 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 LAMP2P13473 410 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 PSMC3P17980 439 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 NFKBIAP25963 317 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 PPARGP37231 505 aaPredicted RBP19.49■□□□□ 0.71
CLN6-205ENST00000564846 CDKN1CP49918 316 aaPredicted RBP19.49■□□□□ 0.71
CLN6-205ENST00000564846 ADARP55265 1226 aaKnown RBP19.49■□□□□ 0.71
CLN6-205ENST00000564846 KLC3Q6P597 504 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 ZYG11AQ6WRX3 759 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 ST13P5Q8NFI4 369 aaPredicted RBP19.49■□□□□ 0.71
CLN6-205ENST00000564846 NXPE3Q969Y0 559 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 MRPL57Q9BQC6 102 aaKnown RBP19.49■□□□□ 0.71
CLN6-205ENST00000564846 TRIM55Q9BYV6 548 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 MRPL46Q9H2W6 279 aaKnown RBP19.49■□□□□ 0.71
CLN6-205ENST00000564846 BRD9Q9H8M2 597 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 IGSF5Q9NSI5 407 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 CPSF2Q9P2I0 782 aaKnown RBP19.49■□□□□ 0.71
CLN6-205ENST00000564846 FNDC3AQ9Y2H6 1198 aaKnown RBP19.49■□□□□ 0.71
CLN6-205ENST00000564846 TSPAN11A1L157 253 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 H2AFYO75367 372 aaKnown RBP19.49■□□□□ 0.71
CLN6-205ENST00000564846 LEFTY1O75610 366 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 SRP72O76094 671 aaKnown RBP19.49■□□□□ 0.71
CLN6-205ENST00000564846 KIAA0754O94854 1291 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 CCDC166P0CW27 439 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 SP100P23497 879 aaPredicted RBP19.49■□□□□ 0.71
CLN6-205ENST00000564846 PTGER3P43115 390 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 GLRBP48167 497 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 PRKAA2P54646 552 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 DLG1Q12959 904 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 CSHL1Q14406 222 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 CTC1Q2NKJ3 1217 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 ARSIQ5FYB1 569 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 CES4AQ5XG92 561 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 TAS2R42Q7RTR8 314 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 SNX20Q7Z614 316 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 HCAR2Q8TDS4 363 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 HEXDCQ8WVB3 486 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 TTC1Q99614 292 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 FAM96AQ9H5X1 160 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 IL26Q9NPH9 171 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 COMMD10Q9Y6G5 202 aa19.49■□□□□ 0.71
CLN6-205ENST00000564846 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.48■□□□□ 0.71
CLN6-205ENST00000564846 TARM1B6A8C7 271 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 TK2O00142 265 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 TBX10O75333 385 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 PRAMEF1O95521 474 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 BPIP17213 487 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 ITGALP20701 1170 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 FMO4P31512 558 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 SPAM1P38567 509 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 MTHFRP42898 656 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 GRM2Q14416 872 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 ACAP2Q15057 778 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 LRRC66Q68CR7 880 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 ZCCHC23Q6ZST2 131 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 TSPAN33Q86UF1 283 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 CRLF3Q8IUI8 442 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 TERB1Q8NA31 727 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 OR6Y1Q8NGX8 325 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 PLA2G2FQ9BZM2 168 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 NPHS2Q9NP85 383 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 OXSMQ9NWU1 459 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 TAS2R13Q9NYV9 303 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 XPR1Q9UBH6 696 aa19.48■□□□□ 0.71
CLN6-205ENST00000564846 KIF26AQ9ULI4 1882 aaPredicted RBP19.48■□□□□ 0.71
CLN6-205ENST00000564846 PRRC2BQ5JSZ5 2229 aaKnown RBP19.47■□□□□ 0.71
CLN6-205ENST00000564846 GLYATL1P3A0A0U1RQE8 302 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 CCT8L1PA6NM43 557 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 TRIM13O60858 407 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 RBP1P09455 135 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 SBK3P0C264 359 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 CD9P21926 228 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 GJA4P35212 333 aa19.47■□□□□ 0.71
CLN6-205ENST00000564846 EIF2DP41214 584 aaKnown RBP19.47■□□□□ 0.71
CLN6-205ENST00000564846 KDSRQ06136 332 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms