RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 LOXL2Q9Y4K0 774 aa18.46■□□□□ 0.55
CLN6-204ENST00000564752 LRP4O75096 1905 aa18.46■□□□□ 0.55
CLN6-204ENST00000564752 AHCTF1Q8WYP5 2266 aa18.46■□□□□ 0.54
CLN6-204ENST00000564752 TENM4Q6N022 2769 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 LRRD1A4D1F6 860 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 PSMD11O00231 422 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 NVLO15381 856 aaKnown RBP18.45■□□□□ 0.54
CLN6-204ENST00000564752 EFSO43281 561 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 PGLSO95336 258 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 FGF1P05230 155 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 JMJD7P0C870 316 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 KDELR1P24390 212 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 TEAD1P28347 426 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 ITKQ08881 620 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 IFI16Q16666 785 aaKnown RBP18.45■□□□□ 0.54
CLN6-204ENST00000564752 Q6ZVL8 140 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 TMPRSS9Q7Z410 1059 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 JAMLQ86YT9 394 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 TEX26Q8N6G2 289 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 PIH1D2Q8WWB5 315 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 RAPGEF5Q92565 580 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 TMEM159Q96B96 161 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 ZNF830Q96NB3 372 aaPredicted RBP18.45■□□□□ 0.54
CLN6-204ENST00000564752 GSDMCQ9BYG8 508 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 SEMA4CQ9C0C4 833 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 POLR1EQ9GZS1 481 aaKnown RBP18.45■□□□□ 0.54
CLN6-204ENST00000564752 HAUS2Q9NVX0 235 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 TRNAU1APQ9NX07 287 aaKnown RBP18.45■□□□□ 0.54
CLN6-204ENST00000564752 PISDQ9UG56 409 aa18.45■□□□□ 0.54
CLN6-204ENST00000564752 UNC13CQ8NB66 2214 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 NPIPB15A6NHN6 443 aaPredicted RBP18.44■□□□□ 0.54
CLN6-204ENST00000564752 B4GAT1O43505 415 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 MX2P20592 715 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 CDK3Q00526 305 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 GBE1Q04446 702 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 ILF3Q12906 894 aaKnown RBP eCLIP18.44■□□□□ 0.54
CLN6-204ENST00000564752 LY6DQ14210 128 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 PTPRRQ15256 657 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 ARMC12Q5T9G4 340 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 KIAA1614Q5VZ46 1190 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 TECPR1Q7Z6L1 1165 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 TSPAN33Q86UF1 283 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 SLITRK4Q8IW52 837 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 PQLC3Q8N755 202 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 TC2NQ8N9U0 490 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.44■□□□□ 0.54
CLN6-204ENST00000564752 ZDHHC1Q8WTX9 485 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 SEMA3CQ99985 751 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 TAAR2Q9P1P5 351 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 SUFUQ9UMX1 484 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 SLC17A4Q9Y2C5 497 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 TTLL3Q9Y4R7 772 aa18.44■□□□□ 0.54
CLN6-204ENST00000564752 MATN3O15232 486 aa18.43■□□□□ 0.54
CLN6-204ENST00000564752 KRT1P04264 644 aa18.43■□□□□ 0.54
CLN6-204ENST00000564752 CCNCP24863 283 aa18.43■□□□□ 0.54
CLN6-204ENST00000564752 GNPDA1P46926 289 aa18.43■□□□□ 0.54
CLN6-204ENST00000564752 MAZP56270 477 aaKnown RBP18.43■□□□□ 0.54
CLN6-204ENST00000564752 DPTQ07507 201 aa18.43■□□□□ 0.54
CLN6-204ENST00000564752 ODF2Q5BJF6 829 aa18.43■□□□□ 0.54
CLN6-204ENST00000564752 RAET1GQ6H3X3 334 aa18.43■□□□□ 0.54
CLN6-204ENST00000564752 USP45Q70EL2 814 aa18.43■□□□□ 0.54
CLN6-204ENST00000564752 PTCD2Q8WV60 388 aaKnown RBP18.43■□□□□ 0.54
CLN6-204ENST00000564752 MAML1Q92585 1016 aa18.43■□□□□ 0.54
CLN6-204ENST00000564752 TSGA13Q96PP4 275 aa18.43■□□□□ 0.54
CLN6-204ENST00000564752 RNF157Q96PX1 679 aa18.43■□□□□ 0.54
CLN6-204ENST00000564752 CMKLR1Q99788 373 aa18.43■□□□□ 0.54
CLN6-204ENST00000564752 SUDS3Q9H7L9 328 aaPredicted RBP18.43■□□□□ 0.54
CLN6-204ENST00000564752 ST14Q9Y5Y6 855 aa18.43■□□□□ 0.54
CLN6-204ENST00000564752 PIEZO2Q9H5I5 2752 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 ZNF487B1APH4 448 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 SPOPO43791 374 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 FZD6O60353 706 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 ECEL1O95672 775 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 IVLP07476 585 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 PDHA1P08559 390 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 TNNT1P13805 278 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 CTPS1P17812 591 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 ITIH1P19827 911 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 AK4P27144 223 aaPredicted RBP18.42■□□□□ 0.54
CLN6-204ENST00000564752 SLC1A1P43005 524 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 POLD2P49005 469 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 OR1D5P58170 312 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 CTBSQ01459 385 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 NR1D2Q14995 579 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 TGIF1Q15583 401 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 LRRC38Q5VT99 294 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 ZNF438Q7Z4V0 828 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 PIM3Q86V86 326 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 VSIG1Q86XK7 387 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 RHOT1Q8IXI2 618 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 CCNYQ8ND76 341 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 FATE1Q969F0 183 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 HDAC11Q96DB2 347 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 SCARF2Q96GP6 870 aaPredicted RBP18.42■□□□□ 0.54
CLN6-204ENST00000564752 RBSNQ9H1K0 784 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 SEMA6CQ9H3T2 930 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 RBM22Q9NW64 420 aaKnown RBP eCLIP18.42■□□□□ 0.54
CLN6-204ENST00000564752 DTLQ9NZJ0 730 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 AMACRQ9UHK6 382 aa18.42■□□□□ 0.54
CLN6-204ENST00000564752 COL6A6A6NMZ7 2263 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms