RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 AP2M1Q96CW1 435 aa12.65□□□□□ -0.38
HERC2-206ENST00000564519 IMP4Q96G21 291 aaKnown RBP12.65□□□□□ -0.38
HERC2-206ENST00000564519 CCDC3Q9BQI4 270 aa12.65□□□□□ -0.38
HERC2-206ENST00000564519 FRMD8Q9BZ67 464 aaPredicted RBP12.65□□□□□ -0.38
HERC2-206ENST00000564519 ABCG4Q9H172 646 aa12.65□□□□□ -0.38
HERC2-206ENST00000564519 CARS2Q9HA77 564 aaKnown RBP12.65□□□□□ -0.38
HERC2-206ENST00000564519 PHPT1Q9NRX4 125 aaPredicted RBP12.65□□□□□ -0.38
HERC2-206ENST00000564519 NCKIPSDQ9NZQ3 722 aa12.65□□□□□ -0.38
HERC2-206ENST00000564519 PADI4Q9UM07 663 aa12.65□□□□□ -0.38
HERC2-206ENST00000564519 ST14Q9Y5Y6 855 aa12.65□□□□□ -0.38
HERC2-206ENST00000564519 ANKRD36A6QL64 1941 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 hCG_1818297A0A087WSY0 165 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 PPP1R12AO14974 1030 aaPredicted RBP12.64□□□□□ -0.39
HERC2-206ENST00000564519 ZNF30P17039 623 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 TEAD1P28347 426 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 GPR1P46091 355 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 GNPDA1P46926 289 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 RPIAP49247 311 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 RPL26P61254 145 aaKnown RBP12.64□□□□□ -0.39
HERC2-206ENST00000564519 DPTQ07507 201 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 WASHC5Q12768 1159 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 TAF1BQ53T94 588 aaPredicted RBP12.64□□□□□ -0.39
HERC2-206ENST00000564519 DOK6Q6PKX4 331 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 LVRNQ6Q4G3 990 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 KDELC2Q7Z4H8 507 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 TRIM74Q86UV6 250 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 NT5DC3Q86UY8 548 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 NRROSQ86YC3 692 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 GPR156Q8NFN8 814 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 SPATA22Q8NHS9 363 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 SCG3Q8WXD2 468 aaKnown RBP12.64□□□□□ -0.39
HERC2-206ENST00000564519 GLMNQ92990 594 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 CCDC74AQ96AQ1 378 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 TADA1Q96BN2 335 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 EID2BQ96D98 161 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 TRIB3Q96RU7 358 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 WDR24Q96S15 920 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 LYSMD1Q96S90 227 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 HERPUD2Q9BSE4 406 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 RIOK2Q9BVS4 552 aaKnown RBP12.64□□□□□ -0.39
HERC2-206ENST00000564519 LACRTQ9GZZ8 138 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 HAUS2Q9NVX0 235 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 KCTD5Q9NXV2 234 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 SUFUQ9UMX1 484 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 RPL26L1Q9UNX3 145 aaKnown RBP12.64□□□□□ -0.39
HERC2-206ENST00000564519 TMEM98Q9Y2Y6 226 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 PLEKHM1Q9Y4G2 1056 aa12.64□□□□□ -0.39
HERC2-206ENST00000564519 TDRD6O60522 2096 aaKnown RBP12.64□□□□□ -0.39
HERC2-206ENST00000564519 URB1O60287 2271 aaKnown RBP12.63□□□□□ -0.39
HERC2-206ENST00000564519 A0A0U1RQJ8 604 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 C1orf232A0A0U1RR37 186 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 A0A1W2PNU3 283 aaPredicted RBP12.63□□□□□ -0.39
HERC2-206ENST00000564519 ANKRD66B4E2M5 251 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 PDE2AO00408 941 aaPredicted RBP12.63□□□□□ -0.39
HERC2-206ENST00000564519 INPP4BO15327 924 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 NOBOXO60393 691 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 ZRANB2O95218 330 aaKnown RBP eCLIP12.63□□□□□ -0.39
HERC2-206ENST00000564519 MT-CYBP00156 380 aaPredicted RBP12.63□□□□□ -0.39
HERC2-206ENST00000564519 PIRTP0C851 137 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 CA4P22748 312 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 AK4P27144 223 aaPredicted RBP12.63□□□□□ -0.39
HERC2-206ENST00000564519 CD68P34810 354 aaPredicted RBP12.63□□□□□ -0.39
HERC2-206ENST00000564519 PDX1P52945 283 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 PCBP4P57723 403 aaKnown RBP12.63□□□□□ -0.39
HERC2-206ENST00000564519 TFDP2Q14188 446 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 PCSK7Q16549 785 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 ISXQ2M1V0 245 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 TBC1D25Q3MII6 688 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 TEX44Q53QW1 395 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 TFDP3Q5H9I0 405 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 OGFOD3Q6PK18 319 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 ADAMTSL4Q6UY14 1074 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 DAAM2Q86T65 1068 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 TMEM139Q8IV31 216 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 CCDC50Q8IVM0 306 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 RCOR2Q8IZ40 523 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 LSMEM2Q8N112 164 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 SDR16C5Q8N3Y7 309 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 ZNF248Q8NDW4 579 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 FAM46DQ8NEK8 389 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 TFB1MQ8WVM0 346 aaKnown RBP12.63□□□□□ -0.39
HERC2-206ENST00000564519 NAT6Q93015 286 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 NAF1Q96HR8 494 aaKnown RBP12.63□□□□□ -0.39
HERC2-206ENST00000564519 DEPDC7Q96QD5 511 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 ANP32EQ9BTT0 268 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 MLPHQ9BV36 600 aaPredicted RBP12.63□□□□□ -0.39
HERC2-206ENST00000564519 HEMGNQ9BXL5 484 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 SLC25A51Q9H1U9 297 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 C10orf88Q9H8K7 445 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 GLOD4Q9HC38 313 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 SPATS2LQ9NUQ6 558 aaKnown RBP12.63□□□□□ -0.39
HERC2-206ENST00000564519 SLC17A4Q9Y2C5 497 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 PCYT1BQ9Y5K3 369 aaPredicted RBP12.63□□□□□ -0.39
HERC2-206ENST00000564519 SHROOM3Q8TF72 1996 aa12.63□□□□□ -0.39
HERC2-206ENST00000564519 APC2O95996 2303 aa12.62□□□□□ -0.39
HERC2-206ENST00000564519 PMS2P1A4D2B8 440 aa12.62□□□□□ -0.39
HERC2-206ENST00000564519 FADS2P1A8MWK0 482 aa12.62□□□□□ -0.39
HERC2-206ENST00000564519 B4DGG1 531 aa12.62□□□□□ -0.39
HERC2-206ENST00000564519 F5H423 210 aaPredicted RBP12.62□□□□□ -0.39
HERC2-206ENST00000564519 USP12O75317 370 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms