RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 HMBSP08397 361 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 POU2F2P09086 479 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 MBL2P11226 248 aaPredicted RBP4.73□□□□□ -1.65
CDR2-203ENST00000563573 GYPEP15421 78 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 EPCAMP16422 314 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 HOXB8P17481 243 aaPredicted RBP4.73□□□□□ -1.65
CDR2-203ENST00000563573 XPAP23025 273 aaPredicted RBP4.73□□□□□ -1.65
CDR2-203ENST00000563573 IL1R2P27930 398 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 HTR7P34969 479 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 PTPN7P35236 360 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 AVPR1AP37288 418 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 MASP1P48740 699 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 HCAR3P49019 387 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 SLC11A2P49281 568 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 HDAC4P56524 1084 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 OCRLQ01968 901 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 SLC25A11Q02978 314 aaKnown RBP4.73□□□□□ -1.65
CDR2-203ENST00000563573 SMTNL2Q2TAL5 461 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 ANKRD20A8PQ5CZ79 823 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 GPR158Q5T848 1215 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 KAZNQ674X7 775 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 CES5AQ6NT32 575 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 TRNP1Q6NT89 227 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 ESRP1Q6NXG1 681 aaKnown RBP4.73□□□□□ -1.65
CDR2-203ENST00000563573 PCSK4Q6UW60 755 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 MFSD7Q6UXD7 560 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 ESPNLQ6ZVH7 1005 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 BNIPLQ7Z465 357 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 TAC4Q86UU9 113 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 DDX42Q86XP3 938 aaKnown RBP eCLIP4.73□□□□□ -1.65
CDR2-203ENST00000563573 SLC13A5Q86YT5 568 aaPredicted RBP4.73□□□□□ -1.65
CDR2-203ENST00000563573 ARFGAP1Q8N6T3 406 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 CDYL2Q8N8U2 506 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 MAB21L3Q8N8X9 362 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 PPP1R14CQ8TAE6 165 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 GRK7Q8WTQ7 553 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 COG1Q8WTW3 980 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 RSAD2Q8WXG1 361 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 AZIN2Q96A70 460 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 HAUS1Q96CS2 278 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 MS4A14Q96JA4 679 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 BTN2A3PQ96KV6 586 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 RNF157Q96PX1 679 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 SNRNP25Q9BV90 132 aaKnown RBP4.73□□□□□ -1.65
CDR2-203ENST00000563573 CARD6Q9BX69 1037 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 HEMGNQ9BXL5 484 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 FRMD8P1Q9BZ68 369 aaPredicted RBP4.73□□□□□ -1.65
CDR2-203ENST00000563573 SIK2Q9H0K1 926 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 SMOC2Q9H3U7 446 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 POFUT1Q9H488 388 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 RETREG1Q9H6L5 497 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 CATSPERBQ9H7T0 1116 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 SFXN1Q9H9B4 322 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 TRPC7Q9HCX4 862 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.73□□□□□ -1.65
CDR2-203ENST00000563573 OSER1Q9NX31 292 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 ARHGEF38Q9NXL2 777 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 RCOR3Q9P2K3 495 aaPredicted RBP4.73□□□□□ -1.65
CDR2-203ENST00000563573 DNMT3BQ9UBC3 853 aaKnown RBP4.73□□□□□ -1.65
CDR2-203ENST00000563573 OR12D3Q9UGF7 316 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 HELZP42694 1942 aaKnown RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 ATG2AQ2TAZ0 1938 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 hCG_1818297A0A087WSY0 165 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 TYW5A2RUC4 315 aaKnown RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 APOL1O14791 398 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 IRAK2O43187 625 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 HOXA3O43365 443 aaPredicted RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 COCHO43405 550 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 ACSL4O60488 711 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 CST8O60676 142 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 FAM20BO75063 409 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 RFPL2O75678 378 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 ZNF189O75820 626 aaPredicted RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 ALDH1A2O94788 518 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 LATS1O95835 1130 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 MOCS2O96007 188 aaPredicted RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 TUBBP07437 444 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 RHOP08100 348 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 GAAP10253 952 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 MYCLP1P12525 358 aaPredicted RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 TCF4P15884 667 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 CHRNA3P32297 505 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 CDKN2BP42772 138 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 MARCKSL1P49006 195 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 NR2C2P49116 596 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 PGFP49763 221 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 ATXN1P54253 815 aaKnown RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 NRG3P56975 720 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 TPI1P60174 286 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 PITX1P78337 314 aaPredicted RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 ITIH3Q06033 890 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 SCAPQ12770 1279 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 EIF4EBP2Q13542 120 aaPredicted RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 DPYSL3Q14195 570 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 SEPT7Q16181 437 aaKnown RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 DPYSL2Q16555 572 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 CCNG2Q16589 344 aa4.72□□□□□ -1.65
CDR2-203ENST00000563573 GLE1Q53GS7 698 aaKnown RBP4.72□□□□□ -1.65
CDR2-203ENST00000563573 RABGAP1LQ5R372 815 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms