RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 HCFC1R1Q9NWW0 138 aa3.2□□□□□ -1.9
HMGB1P33-201ENST00000563485 A4GNTQ9UNA3 340 aa3.2□□□□□ -1.9
HMGB1P33-201ENST00000563485 ERVK-11Q9UQG0 969 aa3.2□□□□□ -1.9
HMGB1P33-201ENST00000563485 SCINQ9Y6U3 715 aa3.2□□□□□ -1.9
HMGB1P33-201ENST00000563485 TAF4O00268 1085 aa3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 TNPO2O14787 897 aaKnown RBP3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 WDR1O75083 606 aa3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 COX7A2P14406 83 aa3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 CNTFP26441 200 aa3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 VEGFCP49767 419 aa3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 NR0B1P51843 470 aaKnown RBP3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 ERVK11-1P61568 191 aa3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 GTF2H2Q13888 395 aa3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 FCN2Q15485 313 aa3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 SLC9B1Q4ZJI4 515 aa3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 SIRPB2Q5JXA9 342 aa3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 PDSS1Q5T2R2 415 aa3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 GTF2H2CQ6P1K8 395 aa3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 FAM76AQ8TAV0 307 aa3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 RHBDF1Q96CC6 855 aa3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 GRAMD2BQ96HH9 432 aa3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 F2RL3Q96RI0 385 aa3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 H2AFJQ9BTM1 129 aa3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 POLR3CQ9BUI4 534 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 PPCSQ9HAB8 311 aa3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 DLGAP4Q9Y2H0 992 aa3.19□□□□□ -1.9
HMGB1P33-201ENST00000563485 ANTXRLA6NF34 631 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 PMS2P5A8MQ11 134 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 SNAP23O00161 211 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 HNRNPA1P09651 372 aaKnown RBP eCLIP3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 IFIT1P09914 478 aaKnown RBP3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 NR1D1P20393 614 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 GABRB2P47870 512 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 GNAQP50148 359 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 GALNT2Q10471 571 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 ZNF234Q14588 700 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 TAF12Q16514 161 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 COL28A1Q2UY09 1125 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 ARHGAP17Q68EM7 881 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 ARHGAP11AQ6P4F7 1023 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 RAD9BQ6WBX8 426 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 PQLC2Q6ZP29 291 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 ANKRD18AQ8IVF6 992 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 KLHDC9Q8NEP7 349 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 ZCCHC10Q8TBK6 192 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 TAS1R2Q8TE23 839 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 PIGTQ969N2 578 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 ZNF524Q96C55 264 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 KLHL29Q96CT2 875 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 ORAI1Q96D31 301 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 KIF1BPQ96EK5 621 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 MAELQ96JY0 434 aaKnown RBP3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 RBM4Q9BWF3 364 aaKnown RBP3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 SEBOXQ9HB31 216 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 PADI3Q9ULW8 664 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 CEPT1Q9Y6K0 416 aa3.18□□□□□ -1.9
HMGB1P33-201ENST00000563485 VCYO14598 125 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 PEX14O75381 377 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 SEC31AO94979 1220 aaKnown RBP3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 EGFP01133 1207 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 ZNF883P0CG24 379 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 ALDH4A1P30038 563 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 HOXA1P49639 335 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 TAS2R38P59533 333 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 CSNK2A1P68400 391 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 RPP30P78346 268 aaKnown RBP3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 CAMK1Q14012 370 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 ALG11Q2TAA5 492 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 TMEM30BQ3MIR4 351 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 FAM171BQ6P995 826 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 BRAT1Q6PJG6 821 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 BEST3Q8N1M1 668 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 ANKRD42Q8N9B4 389 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 ACVR1CQ8NER5 493 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 CSNK2A3Q8NEV1 391 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 OR5R1Q8NH85 324 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 APOPT1Q96IL0 206 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 LITAFQ99732 161 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 IFIH1Q9BYX4 1025 aaKnown RBP3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 EGLN1Q9GZT9 426 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 FKRPQ9H9S5 495 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 PTPRCP08575 1304 aa3.17□□□□□ -1.9
HMGB1P33-201ENST00000563485 A0A1B0GU03 582 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 CTAGE9A4FU28 777 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 ZNHIT1O43257 154 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 TBX6O95947 436 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 POLBP06746 335 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 HOXB5P09067 269 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 HMGB1P09429 215 aaKnown RBP3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 CTAGE8P0CG41 777 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 PAX1P15863 534 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 POLR2CP19387 275 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 CDAP32320 146 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 TAF6P49848 677 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 FOXM1Q08050 763 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 FOXD4Q12950 439 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 FGFBP1Q14512 234 aa3.16□□□□□ -1.9
HMGB1P33-201ENST00000563485 GPR68Q15743 365 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms