RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 HMGCLP35914 325 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 VIPR2P41587 438 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 MAGEA12P43365 314 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 CCNHP51946 323 aaPredicted RBP9.7□□□□□ -0.86
UBFD1-202ENST00000563366 LRRC14Q15048 493 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 DLG2Q15700 870 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 TSNAXIP1Q2TAA8 658 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 MYLK3Q32MK0 819 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 LRIT3Q3SXY7 679 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 FASTKD1Q53R41 847 aaKnown RBP9.7□□□□□ -0.86
UBFD1-202ENST00000563366 GKAP1Q5VSY0 366 aaPredicted RBP9.7□□□□□ -0.86
UBFD1-202ENST00000563366 ZDHHC20Q5W0Z9 365 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 TTC19Q6DKK2 380 aaPredicted RBP9.7□□□□□ -0.86
UBFD1-202ENST00000563366 BRAT1Q6PJG6 821 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 RIPOR1Q6ZS17 1223 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 BTLAQ7Z6A9 289 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 SPATS2Q86XZ4 545 aaKnown RBP9.7□□□□□ -0.86
UBFD1-202ENST00000563366 CILP2Q8IUL8 1156 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 RGL4Q8IZJ4 473 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 DCLK2Q8N568 766 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 OR4L1Q8NH43 312 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 LRRC8CQ8TDW0 803 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 HDAC10Q969S8 669 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 DNAJC1Q96KC8 554 aaKnown RBP9.7□□□□□ -0.86
UBFD1-202ENST00000563366 RPL10LQ96L21 214 aaKnown RBP9.7□□□□□ -0.86
UBFD1-202ENST00000563366 LYSMD1Q96S90 227 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 PAIP2Q9BPZ3 127 aaKnown RBP9.7□□□□□ -0.86
UBFD1-202ENST00000563366 GPR63Q9BZJ6 419 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 CIPCQ9C0C6 399 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 SUV39H2Q9H5I1 410 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 ECT2Q9H8V3 914 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 SNX15Q9NRS6 342 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 IL1RAPL1Q9NZN1 696 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.7□□□□□ -0.86
UBFD1-202ENST00000563366 SLC2A6Q9UGQ3 507 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 APPL1Q9UKG1 709 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 PLA2G4CQ9UP65 541 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 PPIL1Q9Y3C6 166 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 ZNF711Q9Y462 761 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 A0A087X1B8 175 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 FAM95CA0A1B0GW59 222 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 CCDC78A2IDD5 438 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 SLC35F4A4IF30 521 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 FOXO6A8MYZ6 492 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 GOLGA8TH3BQL2 631 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 RFXAPO00287 272 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 BIRC5O15392 142 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 CD3EAPO15446 510 aaKnown RBP9.69□□□□□ -0.86
UBFD1-202ENST00000563366 LINC01565O15544 149 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 TULP3O75386 442 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 ECI2O75521 394 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 ZNF821O75541 412 aaPredicted RBP9.69□□□□□ -0.86
UBFD1-202ENST00000563366 AHSGP02765 367 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 PDGFAP04085 211 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 VIMP08670 466 aaKnown RBP9.69□□□□□ -0.86
UBFD1-202ENST00000563366 NEFHP12036 1026 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 LAMP2P13473 410 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 POU3F3P20264 500 aaPredicted RBP9.69□□□□□ -0.86
UBFD1-202ENST00000563366 PMLP29590 882 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 SLC26A3P40879 764 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 TTPAP49638 278 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 STK19P49842 368 aaPredicted RBP9.69□□□□□ -0.86
UBFD1-202ENST00000563366 ARSDP51689 593 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 STC1P52823 247 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 RAB10P61026 200 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 CTBP1Q13363 440 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 RUNX3Q13761 415 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 MPP2Q14168 576 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 USP10Q14694 798 aaKnown RBP9.69□□□□□ -0.86
UBFD1-202ENST00000563366 GEN1Q17RS7 908 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 TYSND1Q2T9J0 566 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 DGKKQ5KSL6 1271 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 FAM45BPQ6NSW5 357 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 VITQ6UXI7 678 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 CERS6Q6ZMG9 384 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 RAPH1Q70E73 1250 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 ZNF771Q7L3S4 317 aaPredicted RBP9.69□□□□□ -0.86
UBFD1-202ENST00000563366 NLRP8Q86W28 1048 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 CAMK1DQ8IU85 385 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 SUGP1Q8IWZ8 645 aaKnown RBP9.69□□□□□ -0.86
UBFD1-202ENST00000563366 STK40Q8N2I9 435 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 NAT16Q8N8M0 369 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 ANKS4BQ8N8V4 417 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 OR4K2Q8NGD2 314 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 GDAP1Q8TB36 358 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 FAM45AQ8TCE6 357 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 HCAR2Q8TDS4 363 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 ECHDC3Q96DC8 303 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 RSPRY1Q96DX4 576 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 CDKN2AIPNLQ96HQ2 116 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 KLF6Q99612 283 aaPredicted RBP9.69□□□□□ -0.86
UBFD1-202ENST00000563366 HEPHQ9BQS7 1158 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 PLCD4Q9BRC7 762 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 SLC13A1Q9BZW2 595 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 CCDC68Q9H2F9 335 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 TNKS2Q9H2K2 1166 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 EBF3Q9H4W6 596 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 ZDHHC6Q9H6R6 413 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 ZFYVE1Q9HBF4 777 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 POPDC3Q9HBV1 291 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms