RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ZNF451Q9Y4E5 1061 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 ANKUB1A6NFN9 424 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 C21orf140B9A014 251 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 BUB1O43683 1085 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 DPM1O60762 260 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 RAMP2O60895 175 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 LRCH4O75427 683 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 NDUFA10O95299 355 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 TIAF1O95411 115 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 C9P02748 559 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 ELFN1P0C7U0 828 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 CMA1P23946 247 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 GARSP41250 739 aaKnown RBP7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 ACTR1BP42025 376 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 RGRP47804 291 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 POLD2P49005 469 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 NDUFA8P51970 172 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 RNASE9P60153 205 aaKnown RBP7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 ACTR1AP61163 376 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 RPS18P62269 152 aaKnown RBP7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 SH3BP2P78314 561 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 CDK3Q00526 305 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 BIRC2Q13490 618 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 ZRSR2Q15696 482 aaKnown RBP7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 DNAAF5Q86Y56 855 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 CAMK1DQ8IU85 385 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 ZDHHC17Q8IUH5 632 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 CBARPQ8N350 705 aaPredicted RBP7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 FDCSPQ8NFU4 85 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 ADAMTS17Q8TE56 1095 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 NCSTNQ92542 709 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 STAMBPL1Q96FJ0 436 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 AHCYL2Q96HN2 611 aaKnown RBP7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 ZNF641Q96N77 438 aaPredicted RBP7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 SLC38A3Q99624 504 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 ING2Q9H160 280 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 PDFQ9HBH1 243 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 SARS2Q9NP81 518 aaKnown RBP7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 UBE2TQ9NPD8 197 aaPredicted RBP7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 LHX9Q9NQ69 397 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 PHPT1Q9NRX4 125 aaPredicted RBP7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 OGFRQ9NZT2 677 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 HPCAL4Q9UM19 191 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 NTNG1Q9Y2I2 539 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 DOCK10Q96BY6 2186 aa7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 ANKHD1Q8IWZ3 2542 aaKnown RBP7.68□□□□□ -1.18
HERPUD1-206ENST00000563343 TRBV23OR9-2A0A075B6M9 112 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 HEATR9A2RTY3 570 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 ARGFXA6NJG6 315 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 BHMG1C9JSJ3 638 aaPredicted RBP7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 SPAG6O75602 509 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 LRIG2O94898 1065 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 SOD1P00441 154 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 FGF5P12034 268 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 HOXB4P17483 251 aaPredicted RBP7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 ITGA3P26006 1051 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 TEAD1P28347 426 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 ERCC5P28715 1186 aaPredicted RBP7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 SCNN1AP37088 669 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 PTGIRP43119 386 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 SYKP43405 635 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 GABRB2P47870 512 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 EPHA4P54764 986 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 GFERP55789 205 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 PRSS12P56730 875 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 HHEXQ03014 270 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 FOXM1Q08050 763 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 PEX6Q13608 980 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 IL11RAQ14626 422 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 GRM3Q14832 879 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 PLEKHN1Q494U1 663 aaPredicted RBP7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 PYCR3Q53H96 274 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 FOXD4L5Q5VV16 416 aaPredicted RBP7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 GJB7Q6PEY0 223 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 SPNS3Q6ZMD2 512 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 KRBA2Q6ZNG9 492 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 SYVN1Q86TM6 617 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 HPS6Q86YV9 775 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 FOXD4L4Q8WXT5 416 aaPredicted RBP7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 INPP5DQ92835 1189 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 C9orf72Q96LT7 481 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 CFAP57Q96MR6 1250 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 OR2M4Q96R27 311 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 OR6C1Q96RD1 312 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 TUBGCP5Q96RT8 1024 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 SMAD5Q99717 465 aaKnown RBP7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 NCAPGQ9BPX3 1015 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 TBC1D10AQ9BXI6 508 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 SCAND2PQ9GZW5 306 aaPredicted RBP7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 ZMYND15Q9H091 742 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 SLC24A3Q9HC58 644 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 ACSS2Q9NR19 701 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 TMEM51Q9NW97 253 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 MAP10Q9P2G4 905 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 OR12D3Q9UGF7 316 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 KLHL3Q9UH77 587 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 TMEM59LQ9UK28 342 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 PADI1Q9ULC6 663 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 PHTF1Q9UMS5 762 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 PCYT1BQ9Y5K3 369 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms