RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 HPCAL4Q9UM19 191 aa13.41□□□□□ -0.26
SPG7-207ENST00000563218 EFR3BQ9Y2G0 817 aa13.41□□□□□ -0.26
SPG7-207ENST00000563218 CXorf51AA0A1B0GTR3 108 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 TCRBV7S2A1N4TA0A589 114 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 C3orf70A6NLC5 250 aaPredicted RBP13.4□□□□□ -0.26
SPG7-207ENST00000563218 PLD2O14939 933 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 SLC28A2O43868 658 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 PHF2O75151 1096 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 PCCBP05166 539 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 RHOXF2BP0C7M4 288 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 ITIH1P19827 911 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 ETV5P41161 510 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 RGRP47804 291 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 ARSEP51690 589 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 GEMIN4P57678 1058 aaKnown RBP13.4□□□□□ -0.26
SPG7-207ENST00000563218 NFKB2Q00653 900 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 KLF1Q13351 362 aaPredicted RBP13.4□□□□□ -0.26
SPG7-207ENST00000563218 NFATC4Q14934 902 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 CYTH1Q15438 398 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 TAZQ16635 292 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 LINC00303Q3SY05 128 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 TMEM52BQ4KMG9 183 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 EFHC2Q5JST6 749 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 ESRP1Q6NXG1 681 aaKnown RBP13.4□□□□□ -0.26
SPG7-207ENST00000563218 ENPP7Q6UWV6 458 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 RAB11FIP2Q7L804 512 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 TMPRSS9Q7Z410 1059 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 VSIG1Q86XK7 387 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 JAMLQ86YT9 394 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 RFX6Q8HWS3 928 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 FBXO39Q8N4B4 442 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 RTL3Q8N8U3 475 aaKnown RBP13.4□□□□□ -0.26
SPG7-207ENST00000563218 PRELID2Q8N945 189 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 PLA2G15Q8NCC3 412 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 MAGOHBQ96A72 148 aaKnown RBP13.4□□□□□ -0.26
SPG7-207ENST00000563218 NTAN1Q96AB6 310 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 GRAMD1AQ96CP6 724 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 RUNDC3BQ96NL0 473 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 RHOXF2Q9BQY4 288 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 APOOQ9BUR5 198 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 DDX47Q9H0S4 455 aaKnown RBP13.4□□□□□ -0.26
SPG7-207ENST00000563218 PCDH18Q9HCL0 1135 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 PCDH12Q9NPG4 1184 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 MRPL40Q9NQ50 206 aaKnown RBP13.4□□□□□ -0.26
SPG7-207ENST00000563218 HOMER3Q9NSC5 361 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 GPR34Q9UPC5 381 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 DOLKQ9UPQ8 538 aa13.4□□□□□ -0.26
SPG7-207ENST00000563218 ZNF487B1APH4 448 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 RASA4BC9J798 803 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 DYNC1I1O14576 645 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 RASA4O43374 803 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 CD48P09326 243 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 WT1P19544 449 aaPredicted RBP13.39□□□□□ -0.27
SPG7-207ENST00000563218 TFDP2Q14188 446 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 DPYSL3Q14195 570 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 INPP5AQ14642 412 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 LRRC14Q15048 493 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 ELOCQ15369 112 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 SIX1Q15475 284 aaPredicted RBP13.39□□□□□ -0.27
SPG7-207ENST00000563218 DPYSL2Q16555 572 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 CYP1B1Q16678 543 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 CA9Q16790 459 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 PPP6R3Q5H9R7 873 aaPredicted RBP13.39□□□□□ -0.27
SPG7-207ENST00000563218 PRICKLE2Q7Z3G6 844 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 MAATS1Q7Z4T9 603 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 VASH2Q86V25 355 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 PELI3Q8N2H9 469 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 Q8N9G6 341 aaPredicted RBP13.39□□□□□ -0.27
SPG7-207ENST00000563218 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.39□□□□□ -0.27
SPG7-207ENST00000563218 OR1E3Q8WZA6 343 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 CCDC97Q96F63 343 aaPredicted RBP13.39□□□□□ -0.27
SPG7-207ENST00000563218 GFM1Q96RP9 751 aaKnown RBP13.39□□□□□ -0.27
SPG7-207ENST00000563218 CCNL2Q96S94 520 aaPredicted RBP13.39□□□□□ -0.27
SPG7-207ENST00000563218 ZNF670Q9BS34 389 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 HERPUD2Q9BSE4 406 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 LRRC1Q9BTT6 524 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 CLMPQ9H6B4 373 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 PDFQ9HBH1 243 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 DKK3Q9UBP4 350 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 PISDQ9UG56 409 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 MFHAS1Q9Y4C4 1052 aa13.39□□□□□ -0.27
SPG7-207ENST00000563218 ZNF106Q9H2Y7 1883 aaKnown RBP13.39□□□□□ -0.27
SPG7-207ENST00000563218 TSPAN11A1L157 253 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 CAPN8A6NHC0 703 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 J3KR12 359 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 CREB3O43889 395 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 CST8O60676 142 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 RASGRP1O95267 797 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 CTSEP14091 401 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 GM2AP17900 193 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 EPHB2P29323 1055 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 MMP12P39900 470 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 ARL4AP40617 200 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 FNTAP49354 379 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 LIG3P49916 1009 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 INHBCP55103 352 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 SRP54P61011 504 aaKnown RBP13.38□□□□□ -0.27
SPG7-207ENST00000563218 NFATC3Q12968 1075 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 MMRN1Q13201 1228 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 SERINC3Q13530 473 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms