RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 CD38P28907 300 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 MPLP40238 635 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 GPR1P46091 355 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 RABIFP47224 123 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 CLDN2P57739 230 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 CRADDP78560 199 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 SKIDA1Q1XH10 827 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 GCNT7Q6ZNI0 430 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 SUMF1Q8NBK3 374 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 CEP76Q8TAP6 659 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 SCAMP4Q969E2 229 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 DNAJC1Q96KC8 554 aaKnown RBP18.75■□□□□ 0.59
RAB40C-207ENST00000563109 ZSCAN5AQ9BUG6 496 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 RIOK2Q9BVS4 552 aaKnown RBP18.75■□□□□ 0.59
RAB40C-207ENST00000563109 SPATA16Q9BXB7 569 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 MRM3Q9HC36 420 aaKnown RBP18.75■□□□□ 0.59
RAB40C-207ENST00000563109 EPB41L5Q9HCM4 733 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 MBNL1Q9NR56 388 aaKnown RBP18.75■□□□□ 0.59
RAB40C-207ENST00000563109 NLE1Q9NVX2 485 aaPredicted RBP18.75■□□□□ 0.59
RAB40C-207ENST00000563109 NCDNQ9UBB6 729 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 RIMKLBQ9ULI2 386 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 CA5BQ9Y2D0 317 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 KCTD3Q9Y597 815 aa18.75■□□□□ 0.59
RAB40C-207ENST00000563109 GLYATL1P3A0A0U1RQE8 302 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 CCDC78A2IDD5 438 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 MROH6A6NGR9 719 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 MAGEC1O60732 1142 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 RETP07949 1114 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 RHOXF2BP0C7M4 288 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 MAGEA3P43357 314 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 PLTPP55058 493 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 C21orf59P57076 290 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 TUBB4BP68371 445 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 TMPRSS15P98073 1019 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 OVGP1Q12889 678 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 DUOXA1Q1HG43 343 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 BBS9Q3SYG4 887 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 TSTD2Q5T7W7 516 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 HENMT1Q5T8I9 393 aaKnown RBP18.74■□□□□ 0.59
RAB40C-207ENST00000563109 PNCKQ6P2M8 343 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 ABI3BPQ7Z7G0 1075 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 IQCHQ86VS3 1027 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 NLRP8Q86W28 1048 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 TRAM1L1Q8N609 369 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 MFSD2AQ8NA29 543 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 LRRN4CLQ8ND94 238 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 GPR26Q8NDV2 337 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 OR13C4Q8NGS5 318 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 C1orf216Q8TAB5 229 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 SEC14L1Q92503 715 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 PEX13Q92968 403 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 ART4Q93070 314 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 HINFPQ9BQA5 517 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 RHOXF2Q9BQY4 288 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 FAM129AQ9BZQ8 928 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 ARRDC1-AS1Q9H2J1 176 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 WDR26Q9H7D7 661 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 DMGDHQ9UI17 866 aaKnown RBP18.74■□□□□ 0.59
RAB40C-207ENST00000563109 APPL1Q9UKG1 709 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 SOX13Q9UN79 622 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 MAD1L1Q9Y6D9 718 aa18.74■□□□□ 0.59
RAB40C-207ENST00000563109 TP53BP1Q12888 1972 aaPredicted RBP18.73■□□□□ 0.59
RAB40C-207ENST00000563109 MAGEB16A2A368 324 aa18.73■□□□□ 0.59
RAB40C-207ENST00000563109 H0Y8X5 98 aa18.73■□□□□ 0.59
RAB40C-207ENST00000563109 CFIP05156 583 aa18.73■□□□□ 0.59
RAB40C-207ENST00000563109 TEAD1P28347 426 aa18.73■□□□□ 0.59
RAB40C-207ENST00000563109 YPEL5P62699 121 aa18.73■□□□□ 0.59
RAB40C-207ENST00000563109 DHX9Q08211 1270 aaKnown RBP18.73■□□□□ 0.59
RAB40C-207ENST00000563109 INPP5AQ14642 412 aa18.73■□□□□ 0.59
RAB40C-207ENST00000563109 PTPRCAPQ14761 206 aa18.73■□□□□ 0.59
RAB40C-207ENST00000563109 PDPK2PQ6A1A2 396 aa18.73■□□□□ 0.59
RAB40C-207ENST00000563109 FAM151BQ6UXP7 276 aa18.73■□□□□ 0.59
RAB40C-207ENST00000563109 CENPUQ71F23 418 aa18.73■□□□□ 0.59
RAB40C-207ENST00000563109 IFT20Q8IY31 132 aa18.73■□□□□ 0.59
RAB40C-207ENST00000563109 MPP5Q8N3R9 675 aa18.73■□□□□ 0.59
RAB40C-207ENST00000563109 PLA2G15Q8NCC3 412 aa18.73■□□□□ 0.59
RAB40C-207ENST00000563109 KLHDC7BQ96G42 594 aa18.73■□□□□ 0.59
RAB40C-207ENST00000563109 KIFC1Q9BW19 673 aa18.73■□□□□ 0.59
RAB40C-207ENST00000563109 PHPT1Q9NRX4 125 aaPredicted RBP18.73■□□□□ 0.59
RAB40C-207ENST00000563109 TMEM74BQ9NUR3 256 aa18.73■□□□□ 0.59
RAB40C-207ENST00000563109 FKBPLQ9UIM3 349 aa18.73■□□□□ 0.59
RAB40C-207ENST00000563109 SLCO1B1Q9Y6L6 691 aa18.73■□□□□ 0.59
RAB40C-207ENST00000563109 POM121BA6NF01 834 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 CACNB4O00305 520 aaPredicted RBP18.72■□□□□ 0.59
RAB40C-207ENST00000563109 PRAMEF1O95521 474 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 THEGLP0DJG4 465 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 PAMP19021 973 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 ITGALP20701 1170 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 THOP1P52888 689 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 PFN3P60673 137 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 PRAMEP78395 509 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 NHLH1Q02575 133 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 ITGA9Q13797 1035 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 HLTFQ14527 1009 aaKnown RBP eCLIP18.72■□□□□ 0.59
RAB40C-207ENST00000563109 FNBP1LQ5T0N5 605 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 ADAMTSL4Q6UY14 1074 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 Q6ZSR6 202 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 HEATR4Q86WZ0 1026 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 DCP2Q8IU60 420 aaKnown RBP18.72■□□□□ 0.59
RAB40C-207ENST00000563109 OR13H1Q8NG92 308 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms