RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 TRA2AQ13595 282 aaKnown RBP eCLIP12.94□□□□□ -0.34
SF3B3-202ENST00000562722 KRT81Q14533 505 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 NR1D2Q14995 579 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 DPYSL2Q16555 572 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 FILIP1LQ4L180 1135 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 BOLA3Q53S33 107 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 RALGPS1Q5JS13 557 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 POLNQ7Z5Q5 900 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 TRIM74Q86UV6 250 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 C17orf82Q86X59 251 aaPredicted RBP12.94□□□□□ -0.34
SF3B3-202ENST00000562722 NRSN1Q8IZ57 195 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 NAGSQ8N159 534 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.94□□□□□ -0.34
SF3B3-202ENST00000562722 OR4D9Q8NGE8 314 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 SPOCK2Q92563 424 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 ART4Q93070 314 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 PMEPA1Q969W9 287 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 AP2M1Q96CW1 435 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 SCRN2Q96FV2 425 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 CSPG4P5Q96PW8 444 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 SLC38A3Q99624 504 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 HSD3B7Q9H2F3 369 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 NT5MQ9NPB1 228 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 SLC39A1Q9NY26 324 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 IL17BQ9UHF5 180 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 SLC17A4Q9Y2C5 497 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 PLEKHM1Q9Y4G2 1056 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 TTLL3Q9Y4R7 772 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 PIEZO2Q9H5I5 2752 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 UNC13CQ8NB66 2214 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 SCN8AQ9UQD0 1980 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 TRBV23OR9-2A0A075B6M9 112 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 IGHV1OR21-1A0A087WYE8 117 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 A0A0U1RQS6 177 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.93□□□□□ -0.34
SF3B3-202ENST00000562722 GOLGA6L22H0YM25 854 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 DDX3XO00571 662 aaKnown RBP eCLIP12.93□□□□□ -0.34
SF3B3-202ENST00000562722 PPM1DO15297 605 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 ASMTLO95671 621 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 PEX11BO96011 259 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 FGF3P11487 239 aaPredicted RBP12.93□□□□□ -0.34
SF3B3-202ENST00000562722 TCF4P15884 667 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 TEAD1P28347 426 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 SSR1P43307 286 aaKnown RBP12.93□□□□□ -0.34
SF3B3-202ENST00000562722 LIMK2P53671 638 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 SNAP47Q5SQN1 464 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 LRRC66Q68CR7 880 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 ADAMTSL4Q6UY14 1074 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 ZNF761Q86XN6 746 aaPredicted RBP12.93□□□□□ -0.34
SF3B3-202ENST00000562722 GALNT13Q8IUC8 556 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 HTR3CQ8WXA8 447 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 NKD1Q969G9 470 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 MCCC1Q96RQ3 725 aaPredicted RBP12.93□□□□□ -0.34
SF3B3-202ENST00000562722 SEMA3CQ99985 751 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 DPYSL5Q9BPU6 564 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 ABCG8Q9H221 673 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 TMEM9Q9P0T7 183 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 ST14Q9Y5Y6 855 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 AHCTF1Q8WYP5 2266 aa12.93□□□□□ -0.34
SF3B3-202ENST00000562722 EFCAB7A8K855 629 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 INPP4BO15327 924 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 RARAP10276 462 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 THRAP10827 490 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 SKILP12757 684 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 ITGB6P18564 788 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 CSF2RBP32927 897 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 GPLD1P80108 840 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 TYRO3Q06418 890 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 DPTQ07507 201 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 CLCA4Q14CN2 919 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 CCDC183Q5T5S1 534 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 DCAF12Q5T6F0 453 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 E4F1Q66K89 784 aaPredicted RBP12.92□□□□□ -0.34
SF3B3-202ENST00000562722 BORAQ6PGQ7 559 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 CLEC17AQ6ZS10 378 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 RFLNAQ6ZTI6 216 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 TECPR1Q7Z6L1 1165 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 CACNA2D3Q8IZS8 1091 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 CBARPQ8N350 705 aaPredicted RBP12.92□□□□□ -0.34
SF3B3-202ENST00000562722 OR10G6Q8NH81 332 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 SCAMP4Q969E2 229 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 FUCA2Q9BTY2 467 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 DDA1Q9BW61 102 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 ASPSCR1Q9BZE9 553 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 POLR1EQ9GZS1 481 aaKnown RBP12.92□□□□□ -0.34
SF3B3-202ENST00000562722 SLC25A18Q9H1K4 315 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 RTN4Q9NQC3 1192 aaKnown RBP12.92□□□□□ -0.34
SF3B3-202ENST00000562722 AIPL1Q9NZN9 384 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 PCDHGA3Q9Y5H0 932 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 B3GALT1Q9Y5Z6 326 aa12.92□□□□□ -0.34
SF3B3-202ENST00000562722 A8MU76 341 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 TERTO14746 1132 aaKnown RBP12.91□□□□□ -0.34
SF3B3-202ENST00000562722 SUV39H1O43463 412 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 DUX1O43812 170 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 MAP3K6O95382 1288 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 SOD1P00441 154 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 PYGLP06737 847 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 PDHA1P08559 390 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 LIFP15018 202 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 UGT1A3P35503 534 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms