RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 MCRS1Q96EZ8 462 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 PGM2Q96G03 612 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 BTN2A3PQ96KV6 586 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 DUS2Q9NX74 493 aaKnown RBP11.23□□□□□ -0.61
RPAP1-204ENST00000562303 KCTD5Q9NXV2 234 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 CKLFQ9UBR5 152 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 PACSIN3Q9UKS6 424 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 VWA7Q9Y334 891 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 LRRC72A6NJI9 287 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 H3BQF6 201 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 HAT1O14929 419 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 PRNPP04156 253 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 ITGAVP06756 1048 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 OR4Q2P0C623 313 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 IDO1P14902 403 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 PPTC7Q8NI37 304 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 PIH1D2Q8WWB5 315 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 SLC9A6Q92581 669 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 EBNA1BP2Q99848 306 aaKnown RBP11.23□□□□□ -0.61
RPAP1-204ENST00000562303 C1QTNF1Q9BXJ1 281 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 TRPS1Q9UHF7 1281 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 SSR3Q9UNL2 185 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 SORCS3Q9UPU3 1222 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 ERVW-1Q9UQF0 538 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 SMIM35A0A1B0GVV1 85 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 ATP6AP2A0A1C7CYW4 349 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 TP73O15350 636 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 TMCC2O75069 709 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 ATP6AP2O75787 350 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 C1RP00736 705 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 CHN2P52757 468 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 ILF3Q12906 894 aaKnown RBP eCLIP11.23□□□□□ -0.61
RPAP1-204ENST00000562303 DGKZQ13574 1117 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 EEF1DP3Q658K8 133 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 PHF13Q86YI8 300 aaPredicted RBP11.23□□□□□ -0.61
RPAP1-204ENST00000562303 PTCD2Q8WV60 388 aaKnown RBP11.23□□□□□ -0.61
RPAP1-204ENST00000562303 ANKRD27Q96NW4 1050 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 DPEP2Q9H4A9 486 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 MARK1Q9P0L2 795 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 MTRRQ9UBK8 725 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 RGSL1A5PLK6 1076 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 PGRMC2O15173 223 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 FSBPO95073 299 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 SNUPNO95149 360 aaKnown RBP11.23□□□□□ -0.61
RPAP1-204ENST00000562303 SAGP10523 405 aaPredicted RBP11.23□□□□□ -0.61
RPAP1-204ENST00000562303 TCEA1P23193 301 aaKnown RBP11.23□□□□□ -0.61
RPAP1-204ENST00000562303 CMPK1P30085 196 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 QPRTQ15274 297 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 TREML2Q5T2D2 321 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 ABRAXAS1Q6UWZ7 409 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 ING5Q8WYH8 240 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 AGO3Q9H9G7 860 aaKnown RBP11.23□□□□□ -0.61
RPAP1-204ENST00000562303 SNX15Q9NRS6 342 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 RWDD3Q9Y3V2 267 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 MEGF6O75095 1541 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 MYBPC3Q14896 1274 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 RASSF6Q6ZTQ3 369 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 TNS4Q8IZW8 715 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 TCAIMQ8N3R3 496 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 SLC4A11Q8NBS3 891 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 STK32AQ8WU08 396 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 HERVK_113Q902F9 699 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 PMEPA1Q969W9 287 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 IL12RB2Q99665 862 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 TAPBPLQ9BX59 468 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 SETBP1Q9Y6X0 1596 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 SERPINA1P01009 418 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 MMP3P08254 477 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 ALPPL2P10696 532 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 AIF1P55008 147 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 FOXM1Q08050 763 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 SCRN3Q0VDG4 424 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 POTEHQ6S545 545 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 ZNF730Q6ZMV8 503 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 TSHZ1Q6ZSZ6 1077 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 FAM71AQ8IYT1 594 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 ZBTB2Q8N680 514 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 SLC43A3Q8NBI5 491 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 CLHC1Q8NHS4 586 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 CD99L2Q8TCZ2 262 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 ACMSDQ8TDX5 336 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 AP3S1Q92572 193 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 PIGKQ92643 395 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 RIPOR3Q96MK2 946 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 DNAJC11Q9NVH1 559 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 ZNF490Q9ULM2 529 aaPredicted RBP11.22□□□□□ -0.61
RPAP1-204ENST00000562303 ASTN1O14525 1302 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 MDM4O15151 490 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 CYP4B1P13584 511 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 STARP49675 285 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 SP2Q02086 613 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 MED22Q15528 200 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 SPDYCQ5MJ68 293 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 SLC24A5Q71RS6 500 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 ATAD1Q8NBU5 361 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 RNF31Q96EP0 1072 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 CRELD1Q96HD1 420 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 WRAP53Q9BUR4 548 aaKnown RBP11.22□□□□□ -0.61
RPAP1-204ENST00000562303 HCN3Q9P1Z3 774 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 hCG_1818297A0A087WSY0 165 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms