RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 SCUBE1Q8IWY4 988 aa11.62□□□□□ -0.55
PCAT1-202ENST00000561978 NPAS3Q8IXF0 933 aa11.62□□□□□ -0.55
PCAT1-202ENST00000561978 KIRREL3Q8IZU9 778 aa11.62□□□□□ -0.55
PCAT1-202ENST00000561978 SHKBP1Q8TBC3 707 aa11.62□□□□□ -0.55
PCAT1-202ENST00000561978 STMN2Q93045 179 aa11.62□□□□□ -0.55
PCAT1-202ENST00000561978 HDAC10Q969S8 669 aa11.62□□□□□ -0.55
PCAT1-202ENST00000561978 CNDP1Q96KN2 507 aa11.62□□□□□ -0.55
PCAT1-202ENST00000561978 MYRFLQ96LU7 910 aa11.62□□□□□ -0.55
PCAT1-202ENST00000561978 ZSWIM3Q96MP5 696 aa11.62□□□□□ -0.55
PCAT1-202ENST00000561978 TRPC7Q9HCX4 862 aa11.62□□□□□ -0.55
PCAT1-202ENST00000561978 C15orf41Q9Y2V0 281 aa11.62□□□□□ -0.55
PCAT1-202ENST00000561978 VWA7Q9Y334 891 aa11.62□□□□□ -0.55
PCAT1-202ENST00000561978 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.61□□□□□ -0.55
PCAT1-202ENST00000561978 ARHGAP33O14559 1287 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 SLC22A2O15244 555 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 DLX3O60479 287 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 LTA4HP09960 611 aaKnown RBP11.61□□□□□ -0.55
PCAT1-202ENST00000561978 SBK3P0C264 359 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 TPBGLP0DKB5 382 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 TFEBP19484 476 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 GLRBP48167 497 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 OXCT1P55809 520 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 USP4Q13107 963 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 ZNF177Q13360 481 aaPredicted RBP11.61□□□□□ -0.55
PCAT1-202ENST00000561978 ACAP2Q15057 778 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 ARL13AQ5H913 290 aaPredicted RBP11.61□□□□□ -0.55
PCAT1-202ENST00000561978 DMRTA1Q5VZB9 504 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 FAM45BPQ6NSW5 357 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 ATG14Q6ZNE5 492 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 ACAD11Q709F0 780 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 NET1Q7Z628 596 aaPredicted RBP11.61□□□□□ -0.55
PCAT1-202ENST00000561978 PTAR1Q7Z6K3 402 aaPredicted RBP11.61□□□□□ -0.55
PCAT1-202ENST00000561978 SDCCAG8Q86SQ7 713 aaPredicted RBP11.61□□□□□ -0.55
PCAT1-202ENST00000561978 MFSD6LQ8IWD5 586 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 GPR150Q8NGU9 434 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 FAM45AQ8TCE6 357 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 TRMT2BQ96GJ1 504 aaKnown RBP11.61□□□□□ -0.55
PCAT1-202ENST00000561978 PSKH2Q96QS6 385 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 MGME1Q9BQP7 344 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 RMI1Q9H9A7 625 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 TCF7L2Q9NQB0 619 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 MRGBPQ9NV56 204 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 ETAA1Q9NY74 926 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.61□□□□□ -0.55
PCAT1-202ENST00000561978 XPR1Q9UBH6 696 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 STOML1Q9UBI4 398 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 UBA2Q9UBT2 640 aaPredicted RBP11.61□□□□□ -0.55
PCAT1-202ENST00000561978 ZFP37Q9Y6Q3 630 aaPredicted RBP11.61□□□□□ -0.55
PCAT1-202ENST00000561978 ZNF197O14709 1029 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 LDB2O43679 373 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 ENTPD5O75356 428 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 PIGNO95427 931 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 CRTAMO95727 393 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 NDST3O95803 873 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 F11P03951 625 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 LAMP2P13473 410 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 ADSLP30566 484 aaPredicted RBP11.61□□□□□ -0.55
PCAT1-202ENST00000561978 SLC6A4P31645 630 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 CPA2P48052 419 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 TRMT5Q32P41 509 aaKnown RBP11.61□□□□□ -0.55
PCAT1-202ENST00000561978 HECTD2Q5U5R9 776 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 TXNDC8Q6A555 127 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 DENND1CQ8IV53 801 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 SLC22A9Q8IVM8 553 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 CFAP52Q8N1V2 620 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 AFAP1L2Q8N4X5 818 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 HEXDCQ8WVB3 486 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 RSRC1Q96IZ7 334 aaKnown RBP11.61□□□□□ -0.55
PCAT1-202ENST00000561978 UHRF1Q96T88 793 aaPredicted RBP11.61□□□□□ -0.55
PCAT1-202ENST00000561978 CINPQ9BW66 212 aaPredicted RBP11.61□□□□□ -0.55
PCAT1-202ENST00000561978 EML4Q9HC35 981 aaKnown RBP11.61□□□□□ -0.55
PCAT1-202ENST00000561978 GPAMQ9HCL2 828 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 LIMD1Q9UGP4 676 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 CDH7Q9ULB5 785 aa11.61□□□□□ -0.55
PCAT1-202ENST00000561978 GOLGA8QA0A0J9YX86 632 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 A0A1B0GVM2 712 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 GOLGA8OA6NCC3 632 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 TCAF2A6NFQ2 919 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 LOC730098B7Z3J9 87 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 GOLGA8NF8WBI6 632 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 COCHO43405 550 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 RPP40O75818 363 aaKnown RBP11.6□□□□□ -0.55
PCAT1-202ENST00000561978 S1PR4O95977 384 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 PENKP01210 267 aaPredicted RBP11.6□□□□□ -0.55
PCAT1-202ENST00000561978 ASGR2P07307 311 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 GM2AP17900 193 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 GNAZP19086 355 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 GCKP35557 465 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 NSUN2Q08J23 767 aaKnown RBP eCLIP11.6□□□□□ -0.55
PCAT1-202ENST00000561978 ZNF460Q14592 562 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 ADGRF1Q5T601 910 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 RFWD3Q6PCD5 774 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 ZNF783Q6ZMS7 281 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 GJD3Q8N144 294 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 MAB21L3Q8N8X9 362 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 LEMD2Q8NC56 503 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 FGF14Q92915 247 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 FAR2Q96K12 515 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 UBXN10Q96LJ8 280 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 THTPAQ9BU02 230 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms