RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 LSSP48449 732 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 CCL7P80098 99 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 SKOR1P84550 965 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 PTSQ03393 145 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 DPTQ07507 201 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 CCDC173Q0VFZ6 552 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 GALNT3Q14435 633 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 LLGL1Q15334 1064 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 CERCAMQ5T4B2 595 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 WDR48Q8TAF3 677 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 AGAP2Q99490 1192 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 BRD8Q9H0E9 1235 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 DPEP2Q9H4A9 486 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 DDX56Q9NY93 547 aaKnown RBP17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 ATRXP46100 2492 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 PIKFYVEQ9Y2I7 2098 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 MGAQ8IWI9 3026 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 A0A1W2PQM1 296 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 PPP1R12AO14974 1030 aaPredicted RBP17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 PSTPIP1O43586 416 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 HOXB3P14651 431 aaPredicted RBP17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 AK4P27144 223 aaPredicted RBP17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 CDKN2BP42772 138 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 MARCKSL1P49006 195 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 RPL26P61254 145 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 ILF3Q12906 894 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 PDK1Q15118 436 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 QPCTQ16769 361 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 C14orf28Q4W4Y0 310 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 FOXR1Q6PIV2 292 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 ADAMTSL4Q6UY14 1074 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 LRRC69Q6ZNQ3 347 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 ZNF765Q7L2R6 523 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 B3GNT8Q7Z7M8 397 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 NRROSQ86YC3 692 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 CCNJLQ8IV13 435 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 Q8N9G6 341 aaPredicted RBP17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 GPBAR1Q8TDU6 330 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 NAF1Q96HR8 494 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 AGAP3Q96P47 875 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 GFM1Q96RP9 751 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 RIOK2Q9BVS4 552 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 GSDMCQ9BYG8 508 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 FOXP3Q9BZS1 431 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 ASCL3Q9NQ33 180 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 SPATS2LQ9NUQ6 558 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 DNPEPQ9ULA0 475 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 RPL26L1Q9UNX3 145 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 SLC17A4Q9Y2C5 497 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 TMEM98Q9Y2Y6 226 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 ST14Q9Y5Y6 855 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 RNF215Q9Y6U7 377 aa17.13■□□□□ 0.33
CDC42BPB-208ENST00000561271 INPP4BO15327 924 aa17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 RRP8O43159 456 aaKnown RBP17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 DXOO77932 396 aaKnown RBP17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 IVLP07476 585 aa17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 PECAM1P16284 738 aaPredicted RBP17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 ZFXP17010 805 aaPredicted RBP17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 HADHBP55084 474 aaKnown RBP17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 MAZP56270 477 aaKnown RBP17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 PCBP4P57723 403 aaKnown RBP17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 HLTFQ14527 1009 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 KAZNQ674X7 775 aa17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 OGFOD3Q6PK18 319 aa17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 SLC30A9Q6PML9 568 aa17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 MARK2Q7KZI7 788 aaKnown RBP17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 OR6C4Q8NGE1 309 aa17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 ZNF578Q96N58 590 aaPredicted RBP17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 LYSMD1Q96S90 227 aa17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 EPB41L5Q9HCM4 733 aa17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 TRNAU1APQ9NX07 287 aaKnown RBP17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 TAAR2Q9P1P5 351 aa17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 SAE1Q9UBE0 346 aaPredicted RBP17.12■□□□□ 0.33
CDC42BPB-208ENST00000561271 LCA5LO95447 670 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 SLC4A1P02730 911 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 GLB1P16278 677 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 ADCY8P40145 1251 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 ZNF75DP51815 510 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 PCSK7Q16549 785 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 TAZQ16635 292 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 SPOCD1Q6ZMY3 1216 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 LYSMD3Q7Z3D4 306 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 KDELC2Q7Z4H8 507 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 SPRED1Q7Z699 444 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 SPACA3Q8IXA5 215 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 NRSN1Q8IZ57 195 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 LSMEM2Q8N112 164 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 KIAA1524Q8TCG1 905 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 ZDHHC1Q8WTX9 485 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 PATE1Q8WXA2 126 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 GRAMD1AQ96CP6 724 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 IMP4Q96G21 291 aaKnown RBP17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 HIC2Q96JB3 615 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 OR2M4Q96R27 311 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 TRIB3Q96RU7 358 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 MLPHQ9BV36 600 aaPredicted RBP17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 CDH19Q9H159 772 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 RBSNQ9H1K0 784 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 LRRN3Q9H3W5 708 aa17.11■□□□□ 0.33
CDC42BPB-208ENST00000561271 ATXN7L1Q9ULK2 861 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms