RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 DUSP23Q9BVJ7 150 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 IL22Q9GZX6 179 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 DDX47Q9H0S4 455 aaKnown RBP10.68□□□□□ -0.7
TPM1-229ENST00000561242 STN1Q9H668 368 aaKnown RBP10.68□□□□□ -0.7
TPM1-229ENST00000561242 VPS37BQ9H9H4 285 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 BPIFA1Q9NP55 256 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 TM7SF3Q9NS93 570 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 NCKIPSDQ9NZQ3 722 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 ZNHIT2Q9UHR6 403 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 OR1A2Q9Y585 309 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 SNX11Q9Y5W9 270 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.68□□□□□ -0.7
TPM1-229ENST00000561242 SDR42E2A6NKP2 422 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 C4orf47A7E2U8 309 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 INPP4BO15327 924 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 MYCLP1P12525 358 aaPredicted RBP10.67□□□□□ -0.7
TPM1-229ENST00000561242 ETS1P14921 441 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 TPSB2P20231 275 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 NXPH1P58417 271 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 SRP54P61011 504 aaKnown RBP10.67□□□□□ -0.7
TPM1-229ENST00000561242 DAB2P98082 770 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 CAV1Q03135 178 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 DPTQ07507 201 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 ILF3Q12906 894 aaKnown RBP eCLIP10.67□□□□□ -0.7
TPM1-229ENST00000561242 THOC5Q13769 683 aaKnown RBP10.67□□□□□ -0.7
TPM1-229ENST00000561242 NFATC4Q14934 902 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 AGERQ15109 404 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 TPSAB1Q15661 275 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 FASTKD1Q53R41 847 aaKnown RBP10.67□□□□□ -0.7
TPM1-229ENST00000561242 AARS2Q5JTZ9 985 aaKnown RBP10.67□□□□□ -0.7
TPM1-229ENST00000561242 PLA2G2CQ5R387 149 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 STPG1Q5TH74 334 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 PEAR1Q5VY43 1037 aaPredicted RBP10.67□□□□□ -0.7
TPM1-229ENST00000561242 RANBP10Q6VN20 620 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 MACC1Q6ZN28 852 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 TAF8Q7Z7C8 310 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 HEATR4Q86WZ0 1026 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 ZSWIM9Q86XI8 627 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 GALNT13Q8IUC8 556 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 CREG2Q8IUH2 290 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 CBARPQ8N350 705 aaPredicted RBP10.67□□□□□ -0.7
TPM1-229ENST00000561242 SDR16C5Q8N3Y7 309 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 TP53I13Q8NBR0 393 aaPredicted RBP10.67□□□□□ -0.7
TPM1-229ENST00000561242 SPATA4Q8NEY3 305 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 OR4K2Q8NGD2 314 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 ZNF398Q8TD17 642 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 LMX1AQ8TE12 382 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 CENPTQ96BT3 561 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 SNF8Q96H20 258 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 COQ10AQ96MF6 247 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 PLEKHG4BQ96PX9 1271 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 PHOX2BQ99453 314 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 CDC6Q99741 560 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 GSDMCQ9BYG8 508 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 TRIM31Q9BZY9 425 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 ZMYND15Q9H091 742 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 ABCG8Q9H221 673 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 ASB8Q9H765 288 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 RMI1Q9H9A7 625 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 SMARCAL1Q9NZC9 954 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 APOBEC3BQ9UH17 382 aaKnown RBP10.67□□□□□ -0.7
TPM1-229ENST00000561242 PCYOX1Q9UHG3 505 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 FAM169AQ9Y6X4 670 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 TTC28Q96AY4 2481 aa10.67□□□□□ -0.7
TPM1-229ENST00000561242 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.66□□□□□ -0.7
TPM1-229ENST00000561242 POM121BA6NF01 834 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 TNFRSF10CO14798 259 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 FLRT2O43155 660 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 CDK14O94921 469 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 PRLP01236 227 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 HOXC4P09017 264 aaPredicted RBP10.66□□□□□ -0.7
TPM1-229ENST00000561242 SLC2A4P14672 509 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 TEAD1P28347 426 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 GRK6P43250 576 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 CHRNA4P43681 627 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 ARL4CP56559 192 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 KIAA1024LP59773 190 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 TUBB4BP68371 445 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 RALGDSQ12967 914 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 KRT33BQ14525 404 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 IZUMO3Q5VZ72 239 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 TCEAL6Q6IPX3 200 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 LRRC8BQ6P9F7 803 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 FAM151BQ6UXP7 276 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 ADAMTSL4Q6UY14 1074 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 ABI3BPQ7Z7G0 1075 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 CCNJLQ8IV13 435 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 PTCD2Q8WV60 388 aaKnown RBP10.66□□□□□ -0.7
TPM1-229ENST00000561242 TCEAL3Q969E4 200 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 TADA1Q96BN2 335 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 TRIB3Q96RU7 358 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 RTKNQ9BST9 563 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 NAT9Q9BTE0 207 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 TSPYL1Q9H0U9 437 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 CCDC68Q9H2F9 335 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 CARS2Q9HA77 564 aaKnown RBP10.66□□□□□ -0.7
TPM1-229ENST00000561242 ARNT2Q9HBZ2 717 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 CAPN10Q9HC96 672 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 CYP4F12Q9HCS2 524 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 PPANQ9NQ55 473 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms