RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 TPCN2Q8NHX9 752 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 SCAMP4Q969E2 229 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 AGAP2Q99490 1192 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 LGMNQ99538 433 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 SUDS3Q9H7L9 328 aaPredicted RBP15.93■□□□□ 0.14
LMX1B-204ENST00000561065 MOSPD1Q9UJG1 213 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 HYOU1Q9Y4L1 999 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 GOLGA6CA6NDK9 693 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 GOLGA6BA6NDN3 693 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 D6RAR5 112 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 KRT1P04264 644 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 GOLGA6DP0CG33 693 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 TNNT1P13805 278 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 TEAD1P28347 426 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 POLD2P49005 469 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 STC1P52823 247 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 CCL7P80098 99 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 PTSQ03393 145 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 TLE3Q04726 772 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 DPTQ07507 201 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 PPIDQ08752 370 aaKnown RBP15.92■□□□□ 0.14
LMX1B-204ENST00000561065 KIF5AQ12840 1032 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 ARHGEF7Q14155 803 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 SPIDRQ14159 915 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 HLTFQ14527 1009 aaKnown RBP eCLIP15.92■□□□□ 0.14
LMX1B-204ENST00000561065 CERCAMQ5T4B2 595 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 SLC9A4Q6AI14 798 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 OGFOD3Q6PK18 319 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 NPNTQ6UXI9 565 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 TRIM74Q86UV6 250 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 RFX6Q8HWS3 928 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 SPACA3Q8IXA5 215 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 FAM46DQ8NEK8 389 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 SCG3Q8WXD2 468 aaKnown RBP15.92■□□□□ 0.14
LMX1B-204ENST00000561065 RBM41Q96IZ5 413 aaKnown RBP15.92■□□□□ 0.14
LMX1B-204ENST00000561065 OLFM3Q96PB7 478 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 CEP41Q9BYV8 373 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 ABCG8Q9H221 673 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 PRORYQ9H606 182 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 CARS2Q9HA77 564 aaKnown RBP15.92■□□□□ 0.14
LMX1B-204ENST00000561065 PHPT1Q9NRX4 125 aaPredicted RBP15.92■□□□□ 0.14
LMX1B-204ENST00000561065 GOLGA6AQ9NYA3 693 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 DNPEPQ9ULA0 475 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 SUFUQ9UMX1 484 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 HEY1Q9Y5J3 304 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 ATMQ13315 3056 aa15.92■□□□□ 0.14
LMX1B-204ENST00000561065 BTNL10A8MVZ5 291 aa15.91■□□□□ 0.14
LMX1B-204ENST00000561065 RPLP0P05388 317 aaKnown RBP15.91■□□□□ 0.14
LMX1B-204ENST00000561065 FECHP22830 423 aa15.91■□□□□ 0.14
LMX1B-204ENST00000561065 AK4P27144 223 aaPredicted RBP15.91■□□□□ 0.14
LMX1B-204ENST00000561065 GNPDA1P46926 289 aa15.91■□□□□ 0.14
LMX1B-204ENST00000561065 PCBP4P57723 403 aaKnown RBP15.91■□□□□ 0.14
LMX1B-204ENST00000561065 IFI35P80217 286 aaPredicted RBP15.91■□□□□ 0.14
LMX1B-204ENST00000561065 SKOR1P84550 965 aa15.91■□□□□ 0.14
LMX1B-204ENST00000561065 C14orf28Q4W4Y0 310 aa15.91■□□□□ 0.14
LMX1B-204ENST00000561065 C11orf63Q6NUN7 778 aa15.91■□□□□ 0.14
LMX1B-204ENST00000561065 IGF2-ASQ6U949 168 aa15.91■□□□□ 0.14
LMX1B-204ENST00000561065 SYCE1Q8N0S2 351 aa15.91■□□□□ 0.14
LMX1B-204ENST00000561065 LPCAT1Q8NF37 534 aa15.91■□□□□ 0.14
LMX1B-204ENST00000561065 KIAA1524Q8TCG1 905 aa15.91■□□□□ 0.14
LMX1B-204ENST00000561065 GPBAR1Q8TDU6 330 aa15.91■□□□□ 0.14
LMX1B-204ENST00000561065 NAF1Q96HR8 494 aaKnown RBP15.91■□□□□ 0.14
LMX1B-204ENST00000561065 ZNF578Q96N58 590 aaPredicted RBP15.91■□□□□ 0.14
LMX1B-204ENST00000561065 WDR24Q96S15 920 aa15.91■□□□□ 0.14
LMX1B-204ENST00000561065 FOXP3Q9BZS1 431 aa15.91■□□□□ 0.14
LMX1B-204ENST00000561065 GOLPH3Q9H4A6 298 aa15.91■□□□□ 0.14
LMX1B-204ENST00000561065 SPATS2LQ9NUQ6 558 aaKnown RBP15.91■□□□□ 0.14
LMX1B-204ENST00000561065 SLC17A4Q9Y2C5 497 aa15.91■□□□□ 0.14
LMX1B-204ENST00000561065 PCYT1BQ9Y5K3 369 aaPredicted RBP15.91■□□□□ 0.14
LMX1B-204ENST00000561065 RNF215Q9Y6U7 377 aa15.91■□□□□ 0.14
LMX1B-204ENST00000561065 ATRXP46100 2492 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 PDE2AO00408 941 aaPredicted RBP15.9■□□□□ 0.14
LMX1B-204ENST00000561065 RRP8O43159 456 aaKnown RBP15.9■□□□□ 0.14
LMX1B-204ENST00000561065 MTSS1O43312 755 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 ZNF189O75820 626 aaPredicted RBP15.9■□□□□ 0.14
LMX1B-204ENST00000561065 JCHAINP01591 159 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 ZNF30P17039 623 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 CD86P42081 329 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 TNNT3P45378 269 aaPredicted RBP15.9■□□□□ 0.14
LMX1B-204ENST00000561065 EPHB1P54762 984 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 MAZP56270 477 aaKnown RBP15.9■□□□□ 0.14
LMX1B-204ENST00000561065 COPS2P61201 443 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 QPCTQ16769 361 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 DOK6Q6PKX4 331 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 ADAMTSL4Q6UY14 1074 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 LRRC69Q6ZNQ3 347 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 B4GALNT4Q76KP1 1039 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 TMPRSS9Q7Z410 1059 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 SPRED1Q7Z699 444 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 C17orf82Q86X59 251 aaPredicted RBP15.9■□□□□ 0.14
LMX1B-204ENST00000561065 CCNJLQ8IV13 435 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 WDR48Q8TAF3 677 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 PATE1Q8WXA2 126 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 RNF25Q96BH1 459 aaPredicted RBP15.9■□□□□ 0.14
LMX1B-204ENST00000561065 AP2M1Q96CW1 435 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 LYSMD1Q96S90 227 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 PCDH9Q9HC56 1237 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 ATXN7L1Q9ULK2 861 aaPredicted RBP15.9■□□□□ 0.14
LMX1B-204ENST00000561065 TFR2Q9UP52 801 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 PLEKHM1Q9Y4G2 1056 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms