RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 STX3Q13277 289 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 PTPRRQ15256 657 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 E2F5Q15329 346 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 GPR33Q49SQ1 333 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 LRRC8EQ6NSJ5 796 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 CGB2Q6NT52 195 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 KLC3Q6P597 504 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 ZNF549Q6P9A3 640 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 CRTC1Q6UUV9 634 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 ZYG11AQ6WRX3 759 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 SNX20Q7Z614 316 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 TERB1Q8NA31 727 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 PPP1R14CQ8TAE6 165 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 UCMAQ8WVF2 138 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 KCTD4Q8WVF5 259 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 UBXN10Q96LJ8 280 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 KLHL32Q96NJ5 620 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 GPR78Q96P69 363 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 MRPL57Q9BQC6 102 aaKnown RBP17.07■□□□□ 0.32
HDDC3-206ENST00000561036 CCDC68Q9H2F9 335 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 GPAMQ9HCL2 828 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 BPIFA1Q9NP55 256 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 ZNF358Q9NW07 568 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 KLHL14Q9P2G3 628 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 CRYL1Q9Y2S2 319 aa17.07■□□□□ 0.32
HDDC3-206ENST00000561036 EDDM13A0A1B0GTR0 161 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 NPIPB15A6NHN6 443 aaPredicted RBP17.06■□□□□ 0.32
HDDC3-206ENST00000561036 PRRT4C9JH25 899 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 G3V2L1 256 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 SRP72O76094 671 aaKnown RBP17.06■□□□□ 0.32
HDDC3-206ENST00000561036 LTA4HP09960 611 aaKnown RBP17.06■□□□□ 0.32
HDDC3-206ENST00000561036 MYL2P10916 166 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 FGF3P11487 239 aaPredicted RBP17.06■□□□□ 0.32
HDDC3-206ENST00000561036 ZNF30P17039 623 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 ITGALP20701 1170 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 SPAM1P38567 509 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 CDKN2DP55273 166 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 IRX4P78413 519 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 ASPHQ12797 758 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 HNRNPA1L2Q32P51 320 aaKnown RBP17.06■□□□□ 0.32
HDDC3-206ENST00000561036 ZNF805Q5CZA5 627 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 ARSIQ5FYB1 569 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 NUDT18Q6ZVK8 323 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 YTHDF3Q7Z739 585 aaKnown RBP17.06■□□□□ 0.32
HDDC3-206ENST00000561036 PIANPQ8IYJ0 282 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 TNS4Q8IZW8 715 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 NXPE3Q969Y0 559 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 NXNL1Q96CM4 212 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 MSLNLQ96KJ4 702 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 PLA2G2FQ9BZM2 168 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 MRPL46Q9H2W6 279 aaKnown RBP17.06■□□□□ 0.32
HDDC3-206ENST00000561036 RAD18Q9NS91 495 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 IGSF5Q9NSI5 407 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 THAP1Q9NVV9 213 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 CLDND1Q9NY35 253 aa17.06■□□□□ 0.32
HDDC3-206ENST00000561036 KIAA1549LQ6ZVL6 1849 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 TRBV5-4A0A0C4DH59 114 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 UBA6A0AVT1 1052 aaPredicted RBP17.05■□□□□ 0.32
HDDC3-206ENST00000561036 GOLGA8CPA6NN73 597 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 UPK3BL1B0FP48 263 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 TARM1B6A8C7 271 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 UPK3BL2E5RIL1 263 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 LEFTY1O75610 366 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 ESR1P03372 595 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 PRNPP04156 253 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 RBP1P09455 135 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 RALBP11234 206 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 PKMP14618 531 aaKnown RBP17.05■□□□□ 0.32
HDDC3-206ENST00000561036 BPIP17213 487 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 GJA4P35212 333 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 GMPRP36959 345 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 OPRD1P41143 372 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 HNRNPH2P55795 449 aaKnown RBP17.05■□□□□ 0.32
HDDC3-206ENST00000561036 OCRLQ01968 901 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 KDSRQ06136 332 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 ACAP2Q15057 778 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 ITPRIPL2Q3MIP1 535 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 FNDC3BQ53EP0 1204 aaKnown RBP17.05■□□□□ 0.32
HDDC3-206ENST00000561036 LRRC66Q68CR7 880 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 PSAPL1Q6NUJ1 521 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 C10orf107Q8IVU9 208 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 FSTL5Q8N475 847 aaPredicted RBP17.05■□□□□ 0.32
HDDC3-206ENST00000561036 TMEM151AQ8N4L1 468 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 TMIEQ8NEW7 156 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 OR6Y1Q8NGX8 325 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 DTX3LQ8TDB6 740 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 HEXDCQ8WVB3 486 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 MYLIPQ8WY64 445 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 SCYL1Q96KG9 808 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 PLEKHG4BQ96PX9 1271 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 KXD1Q9BQD3 176 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 TRMT61BQ9BVS5 477 aaKnown RBP17.05■□□□□ 0.32
HDDC3-206ENST00000561036 TRIM55Q9BYV6 548 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 SYTL2Q9HCH5 934 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 IL26Q9NPH9 171 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 OXSMQ9NWU1 459 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 TAS2R13Q9NYV9 303 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 EPS15L1Q9UBC2 864 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 PCDHB1Q9Y5F3 818 aa17.05■□□□□ 0.32
HDDC3-206ENST00000561036 MTCH2Q9Y6C9 303 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms