RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 CAPSLQ8WWF8 208 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 TUBGCP3Q96CW5 907 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 HDAC11Q96DB2 347 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 FICDQ9BVA6 458 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 DNAJC15Q9Y5T4 150 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 MSI1O43347 362 aaKnown RBP16.47■□□□□ 0.23
TPM1-228ENST00000560975 VTNP04004 478 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 HTR1AP08908 422 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 LINC00032P0C843 101 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 AGXTP21549 392 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 GSTM2P28161 218 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 CHRNA4P43681 627 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 ARHGAP17Q68EM7 881 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 CATSPER4Q7RTX7 472 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.47■□□□□ 0.23
TPM1-228ENST00000560975 C18orf25Q96B23 403 aaPredicted RBP16.47■□□□□ 0.23
TPM1-228ENST00000560975 TEKT5Q96M29 485 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 TEPSINQ96N21 525 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 BDH2Q9BUT1 245 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 PCDHGA8Q9Y5G5 932 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 H0YAE9 185 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 GAS2O43903 313 aaKnown RBP16.46■□□□□ 0.23
TPM1-228ENST00000560975 SIX3O95343 332 aaPredicted RBP16.46■□□□□ 0.23
TPM1-228ENST00000560975 NADKO95544 446 aaPredicted RBP16.46■□□□□ 0.23
TPM1-228ENST00000560975 ALOX5P09917 674 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 LTA4HP09960 611 aaKnown RBP16.46■□□□□ 0.23
TPM1-228ENST00000560975 THRBP10828 461 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 BMP4P12644 408 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 TKTP29401 623 aaKnown RBP16.46■□□□□ 0.23
TPM1-228ENST00000560975 IST1P53990 364 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 SH3BP2P78314 561 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 SMYD5Q6GMV2 418 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 HTRA1Q92743 480 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 CCDC126Q96EE4 140 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 MAGED4Q96JG8 741 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 CTRCQ99895 268 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 VTA1Q9NP79 307 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 C8orf4Q9NR00 106 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 GMIPQ9P107 970 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 ANKMY1Q9P2S6 941 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 FAM47E-STBD1D6RA91 191 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 CLDN5O00501 218 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 EGFRP00533 1210 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 HGFP14210 728 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 ADRA1BP35368 520 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 ATP4BP51164 291 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 OAZ1P54368 228 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 DIO3P55073 304 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 DPY19L1Q2PZI1 675 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 ANKRD34AQ69YU3 496 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 LDB1Q86U70 411 aaPredicted RBP16.46■□□□□ 0.23
TPM1-228ENST00000560975 C8orf59Q8N0T1 100 aaPredicted RBP16.46■□□□□ 0.23
TPM1-228ENST00000560975 CLIP4Q8N3C7 705 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 PPHLN1Q8NEY8 458 aaKnown RBP16.46■□□□□ 0.23
TPM1-228ENST00000560975 NDNFQ8TB73 568 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 OSCP1Q8WVF1 389 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 TMBIM1Q969X1 311 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 SDCCAG3Q96C92 435 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 TBL1YQ9BQ87 522 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 TOR3AQ9H497 397 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 SMURF2Q9HAU4 748 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 MID1IP1Q9NPA3 183 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 TRHDEQ9UKU6 1024 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 AKT3Q9Y243 479 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 PCDHB3Q9Y5E6 796 aa16.46■□□□□ 0.23
TPM1-228ENST00000560975 M0R3G1 203 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 NOBOXO60393 691 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 NR4A2P43354 598 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 POU4F1Q01851 419 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 PPP1R8Q12972 351 aaKnown RBP16.45■□□□□ 0.22
TPM1-228ENST00000560975 SLC13A2Q13183 592 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 SKIV2LQ15477 1246 aaKnown RBP16.45■□□□□ 0.22
TPM1-228ENST00000560975 NOMO2Q5JPE7 1267 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 PAGE3Q5JUK9 113 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 GPR158Q5T848 1215 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 PRAMEF18Q5VWM3 479 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 TAF2Q6P1X5 1199 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 PLEKHG7Q6ZR37 379 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 ARHGAP36Q6ZRI8 547 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 PRR23BQ6ZRT6 265 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 RALGPS2Q86X27 583 aaPredicted RBP16.45■□□□□ 0.22
TPM1-228ENST00000560975 TTC30BQ8N4P2 665 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 COPS5Q92905 334 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 GLMNQ92990 594 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 ZMAT2Q96NC0 199 aaKnown RBP16.45■□□□□ 0.22
TPM1-228ENST00000560975 GPR20Q99678 358 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 NOL6Q9H6R4 1146 aaKnown RBP16.45■□□□□ 0.22
TPM1-228ENST00000560975 SCUBE2Q9NQ36 999 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 HPS4Q9NQG7 708 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 ENPP5Q9UJA9 477 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 PMPCBO75439 489 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 DNAJB1P25685 340 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 DAG1Q14118 895 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 ACAP2Q15057 778 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 CTF1Q16619 201 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 UNC50Q53HI1 259 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 FBXO48Q5FWF7 155 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 CTU1Q7Z7A3 348 aaKnown RBP16.45■□□□□ 0.22
TPM1-228ENST00000560975 CNTN4Q8IWV2 1026 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 SCML4Q8N228 414 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms