RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 VIPR1P32241 457 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 RFC1P35251 1148 aaPredicted RBP17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 MAPK9P45984 424 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 PAPOLAP51003 745 aaKnown RBP17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 AP1S1P61966 158 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 HHEXQ03014 270 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 RFTN1Q14699 578 aaPredicted RBP17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 CNGA3Q16281 694 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 VWA3BQ502W6 1294 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 KLHDC7AQ5VTJ3 777 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 LZTR1Q8N653 840 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 SLC37A2Q8TED4 501 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 SH3KBP1Q96B97 665 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 DTD2Q96FN9 168 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 ULBP3Q9BZM4 244 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 CHMP5Q9NZZ3 219 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 KLHL3Q9UH77 587 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 FZD10Q9ULW2 581 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 ST14Q9Y5Y6 855 aa17.74■□□□□ 0.43
TSPAN3-208ENST00000560514 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 A1L4Q6 167 aa17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 HEXIM1O94992 359 aaKnown RBP17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 MAP3K6O95382 1288 aa17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 DLGAP3O95886 979 aa17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 CYP1A1P04798 512 aaPredicted RBP17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 UCHL3P15374 230 aa17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 HTR7P34969 479 aa17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 ETV3P41162 512 aa17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 GPR1P46091 355 aa17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 NSFP46459 744 aaKnown RBP17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 RENBPP51606 427 aa17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 FOXM1Q08050 763 aa17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 NFATC2Q13469 925 aa17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 CAMK4Q16566 473 aa17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 WDR59Q6PJI9 974 aa17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 TRIM72Q6ZMU5 477 aa17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 GALNT13Q8IUC8 556 aa17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 PTCD2Q8WV60 388 aaKnown RBP17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 STK33Q9BYT3 514 aa17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 SLC39A8Q9C0K1 460 aa17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 KCND3Q9UK17 655 aa17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 TLK1Q9UKI8 766 aa17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 PLEKHM1Q9Y4G2 1056 aa17.73■□□□□ 0.43
TSPAN3-208ENST00000560514 SPENQ96T58 3664 aaKnown RBP17.72■□□□□ 0.43
TSPAN3-208ENST00000560514 F8VZ95 297 aa17.72■□□□□ 0.43
TSPAN3-208ENST00000560514 TRAFD1O14545 582 aaPredicted RBP17.72■□□□□ 0.43
TSPAN3-208ENST00000560514 DAPK3O43293 454 aa17.72■□□□□ 0.43
TSPAN3-208ENST00000560514 CPP00450 1065 aa17.72■□□□□ 0.43
TSPAN3-208ENST00000560514 TEAD1P28347 426 aa17.72■□□□□ 0.43
TSPAN3-208ENST00000560514 CDR2Q01850 454 aa17.72■□□□□ 0.43
TSPAN3-208ENST00000560514 CT47A1Q5JQC4 288 aaPredicted RBP17.72■□□□□ 0.43
TSPAN3-208ENST00000560514 C6orf15Q6UXA7 325 aaPredicted RBP17.72■□□□□ 0.43
TSPAN3-208ENST00000560514 MARK2Q7KZI7 788 aaKnown RBP17.72■□□□□ 0.43
TSPAN3-208ENST00000560514 SFRP1Q8N474 314 aa17.72■□□□□ 0.43
TSPAN3-208ENST00000560514 SLC20A1Q8WUM9 679 aa17.72■□□□□ 0.43
TSPAN3-208ENST00000560514 STAMBPL1Q96FJ0 436 aa17.72■□□□□ 0.43
TSPAN3-208ENST00000560514 ADAM22Q9P0K1 906 aa17.72■□□□□ 0.43
TSPAN3-208ENST00000560514 CROTQ9UKG9 612 aa17.72■□□□□ 0.43
TSPAN3-208ENST00000560514 CDC14CA4D256 554 aa17.71■□□□□ 0.43
TSPAN3-208ENST00000560514 PSMD11O00231 422 aa17.71■□□□□ 0.43
TSPAN3-208ENST00000560514 DFFAO00273 331 aa17.71■□□□□ 0.43
TSPAN3-208ENST00000560514 CCP110O43303 1012 aa17.71■□□□□ 0.43
TSPAN3-208ENST00000560514 GFPT2O94808 682 aa17.71■□□□□ 0.43
TSPAN3-208ENST00000560514 F8A1P23610 371 aa17.71■□□□□ 0.43
TSPAN3-208ENST00000560514 PMS2P54278 862 aa17.71■□□□□ 0.43
TSPAN3-208ENST00000560514 LRP8Q14114 963 aa17.71■□□□□ 0.43
TSPAN3-208ENST00000560514 HSD11B1LQ7Z5J1 315 aa17.71■□□□□ 0.43
TSPAN3-208ENST00000560514 TUBGCP2Q9BSJ2 902 aa17.71■□□□□ 0.43
TSPAN3-208ENST00000560514 NAA15Q9BXJ9 866 aaKnown RBP17.71■□□□□ 0.43
TSPAN3-208ENST00000560514 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.71■□□□□ 0.43
TSPAN3-208ENST00000560514 TWSG1Q9GZX9 223 aa17.71■□□□□ 0.43
TSPAN3-208ENST00000560514 SARS2Q9NP81 518 aaKnown RBP17.71■□□□□ 0.43
TSPAN3-208ENST00000560514 NOCTQ9UK39 431 aaKnown RBP17.71■□□□□ 0.43
TSPAN3-208ENST00000560514 PHTF1Q9UMS5 762 aa17.71■□□□□ 0.43
TSPAN3-208ENST00000560514 TMEM98Q9Y2Y6 226 aa17.71■□□□□ 0.43
TSPAN3-208ENST00000560514 OAS3Q9Y6K5 1087 aaKnown RBP17.71■□□□□ 0.43
TSPAN3-208ENST00000560514 PIPSLA2A3N6 862 aa17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 EEF2KO00418 725 aaKnown RBP17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 ASMTLO95671 621 aa17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 DDAH2O95865 285 aa17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 CALB1P05937 261 aa17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 CCNYL3P0C7X3 344 aa17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 SLC2A4P14672 509 aa17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 ZNF143P52747 638 aaPredicted RBP17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 EPHA4P54764 986 aa17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 FMO1Q01740 532 aa17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 PYCR3Q53H96 274 aa17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 DPY19L2P1Q6NXN4 242 aa17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 Q6ZVL8 140 aa17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 SLC9B2Q86UD5 537 aa17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 PLXDC1Q8IUK5 500 aa17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 C3orf20Q8ND61 904 aa17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 SCARF2Q96GP6 870 aaPredicted RBP17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 EPB41L1Q9H4G0 881 aa17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 CNOT8Q9UFF9 292 aaKnown RBP17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 PCDHGC4Q9Y5F7 938 aa17.7■□□□□ 0.42
TSPAN3-208ENST00000560514 TEP1Q99973 2627 aaKnown RBP17.69■□□□□ 0.42
TSPAN3-208ENST00000560514 SIGLEC16A6NMB1 481 aa17.69■□□□□ 0.42
TSPAN3-208ENST00000560514 SOCS5O75159 536 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms