RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 NT5C3BQ969T7 300 aa10.24□□□□□ -0.77
APH1B-208ENST00000560353 SLC35C1Q96A29 364 aa10.24□□□□□ -0.77
APH1B-208ENST00000560353 SH3KBP1Q96B97 665 aa10.24□□□□□ -0.77
APH1B-208ENST00000560353 RNF31Q96EP0 1072 aa10.24□□□□□ -0.77
APH1B-208ENST00000560353 CPXM1Q96SM3 734 aa10.24□□□□□ -0.77
APH1B-208ENST00000560353 BARD1Q99728 777 aaKnown RBP10.24□□□□□ -0.77
APH1B-208ENST00000560353 TEX101Q9BY14 249 aa10.24□□□□□ -0.77
APH1B-208ENST00000560353 FRMD8Q9BZ67 464 aaPredicted RBP10.24□□□□□ -0.77
APH1B-208ENST00000560353 EPB41L1Q9H4G0 881 aa10.24□□□□□ -0.77
APH1B-208ENST00000560353 UPF2Q9HAU5 1272 aaKnown RBP10.24□□□□□ -0.77
APH1B-208ENST00000560353 LHX9Q9NQ69 397 aa10.24□□□□□ -0.77
APH1B-208ENST00000560353 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.24□□□□□ -0.77
APH1B-208ENST00000560353 COPG2Q9UBF2 871 aa10.24□□□□□ -0.77
APH1B-208ENST00000560353 ARMCX3Q9UH62 379 aaPredicted RBP10.24□□□□□ -0.77
APH1B-208ENST00000560353 USP25Q9UHP3 1055 aa10.24□□□□□ -0.77
APH1B-208ENST00000560353 SUFUQ9UMX1 484 aa10.24□□□□□ -0.77
APH1B-208ENST00000560353 MTMR6Q9Y217 621 aa10.24□□□□□ -0.77
APH1B-208ENST00000560353 B3GNT3Q9Y2A9 372 aa10.24□□□□□ -0.77
APH1B-208ENST00000560353 MAP1AP78559 2803 aaPredicted RBP10.24□□□□□ -0.77
APH1B-208ENST00000560353 CROCCQ5TZA2 2017 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 TRBV23OR9-2A0A075B6M9 112 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 RASA4BC9J798 803 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 PMM2O15305 246 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 INSIG1O15503 277 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 RASA4O43374 803 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 THAP12O43422 761 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 RAMP2O60895 175 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 PIGNO95427 931 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 IVLP07476 585 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 TFE3P19532 575 aaPredicted RBP10.23□□□□□ -0.77
APH1B-208ENST00000560353 FMO5P49326 533 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 SULT1E1P49888 294 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 HDAC4P56524 1084 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 RPS15P62841 145 aaKnown RBP10.23□□□□□ -0.77
APH1B-208ENST00000560353 SLC6A3Q01959 620 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.23□□□□□ -0.77
APH1B-208ENST00000560353 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.23□□□□□ -0.77
APH1B-208ENST00000560353 AFMIDQ63HM1 303 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 LIPIQ6XZB0 460 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 WDTC1Q8N5D0 677 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 ST6GALNAC3Q8NDV1 305 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 ZNF397Q8NF99 534 aaPredicted RBP10.23□□□□□ -0.77
APH1B-208ENST00000560353 FDCSPQ8NFU4 85 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 UBE2Q2Q8WVN8 375 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 HDAC11Q96DB2 347 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 INTS4Q96HW7 963 aaKnown RBP10.23□□□□□ -0.77
APH1B-208ENST00000560353 ELMO2Q96JJ3 720 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 OR6C1Q96RD1 312 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 NUDT9Q9BW91 350 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 BRD8Q9H0E9 1235 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 STN1Q9H668 368 aaKnown RBP10.23□□□□□ -0.77
APH1B-208ENST00000560353 AGPAT4Q9NRZ5 378 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 GPR83Q9NYM4 423 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 C5AR2Q9P296 337 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 SLC17A4Q9Y2C5 497 aa10.23□□□□□ -0.77
APH1B-208ENST00000560353 KLF2Q9Y5W3 355 aaPredicted RBP10.23□□□□□ -0.77
APH1B-208ENST00000560353 DIDO1Q9BTC0 2240 aaKnown RBP10.22□□□□□ -0.77
APH1B-208ENST00000560353 TOX3O15405 576 aaPredicted RBP10.22□□□□□ -0.77
APH1B-208ENST00000560353 SPAG6O75602 509 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 FGF5P12034 268 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 RHOQP17081 205 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 CAPN3P20807 821 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 LPOP22079 712 aaPredicted RBP10.22□□□□□ -0.77
APH1B-208ENST00000560353 MAPK9P45984 424 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 POLD2P49005 469 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 HHEXQ03014 270 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 NFATC2Q13469 925 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 CUL4AQ13619 759 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 ACOX1Q15067 660 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 SLC25A52Q3SY17 297 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 DNAAF5Q86Y56 855 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 LMO3Q8TAP4 145 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 SMAD5Q99717 465 aaKnown RBP10.22□□□□□ -0.77
APH1B-208ENST00000560353 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.22□□□□□ -0.77
APH1B-208ENST00000560353 SYNCQ9H7C4 482 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 SARS2Q9NP81 518 aaKnown RBP10.22□□□□□ -0.77
APH1B-208ENST00000560353 CHST11Q9NPF2 352 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 NDFIP2Q9NV92 336 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 KCTD5Q9NXV2 234 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 DNAI1Q9UI46 699 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 PCDHA7Q9UN72 937 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 OSGIN2Q9Y236 505 aa10.22□□□□□ -0.77
APH1B-208ENST00000560353 A0A1B0GUH1 482 aa10.21□□□□□ -0.77
APH1B-208ENST00000560353 A6NL46 340 aa10.21□□□□□ -0.77
APH1B-208ENST00000560353 PLEKP08567 350 aaPredicted RBP10.21□□□□□ -0.77
APH1B-208ENST00000560353 COX6B1P14854 86 aa10.21□□□□□ -0.77
APH1B-208ENST00000560353 GNA15P30679 374 aa10.21□□□□□ -0.77
APH1B-208ENST00000560353 PTGIRP43119 386 aa10.21□□□□□ -0.77
APH1B-208ENST00000560353 POLR2LP62875 67 aaKnown RBP10.21□□□□□ -0.77
APH1B-208ENST00000560353 SH3BP2P78314 561 aa10.21□□□□□ -0.77
APH1B-208ENST00000560353 FKBP3Q00688 224 aaKnown RBP10.21□□□□□ -0.77
APH1B-208ENST00000560353 RALGDSQ12967 914 aa10.21□□□□□ -0.77
APH1B-208ENST00000560353 IL10RAQ13651 578 aa10.21□□□□□ -0.77
APH1B-208ENST00000560353 CRB2Q5IJ48 1285 aa10.21□□□□□ -0.77
APH1B-208ENST00000560353 LYPLAL1Q5VWZ2 237 aa10.21□□□□□ -0.77
APH1B-208ENST00000560353 RWDD4Q6NW29 188 aaKnown RBP10.21□□□□□ -0.77
APH1B-208ENST00000560353 CYB5D1Q6P9G0 228 aa10.21□□□□□ -0.77
APH1B-208ENST00000560353 RETREG3Q86VR2 466 aa10.21□□□□□ -0.77
APH1B-208ENST00000560353 NLRP14Q86W24 1093 aa10.21□□□□□ -0.77
APH1B-208ENST00000560353 PPP1R3BQ86XI6 285 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms