RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 NAP1L1P55209 391 aaKnown RBP13.17□□□□□ -0.3
SMAD3-213ENST00000560175 INSM1Q01101 510 aaPredicted RBP13.17□□□□□ -0.3
SMAD3-213ENST00000560175 KLF1Q13351 362 aaPredicted RBP13.17□□□□□ -0.3
SMAD3-213ENST00000560175 HENMT1Q5T8I9 393 aaKnown RBP13.17□□□□□ -0.3
SMAD3-213ENST00000560175 TMC3Q7Z5M5 1100 aa13.17□□□□□ -0.3
SMAD3-213ENST00000560175 ZC3H18Q86VM9 953 aaKnown RBP13.17□□□□□ -0.3
SMAD3-213ENST00000560175 HEATR4Q86WZ0 1026 aa13.17□□□□□ -0.3
SMAD3-213ENST00000560175 CCDC50Q8IVM0 306 aa13.17□□□□□ -0.3
SMAD3-213ENST00000560175 SLC35F3Q8IY50 421 aa13.17□□□□□ -0.3
SMAD3-213ENST00000560175 ZNF567Q8N184 647 aa13.17□□□□□ -0.3
SMAD3-213ENST00000560175 DCBLD1Q8N8Z6 715 aa13.17□□□□□ -0.3
SMAD3-213ENST00000560175 GPR156Q8NFN8 814 aa13.17□□□□□ -0.3
SMAD3-213ENST00000560175 ACTL9Q8TC94 416 aa13.17□□□□□ -0.3
SMAD3-213ENST00000560175 GPBAR1Q8TDU6 330 aa13.17□□□□□ -0.3
SMAD3-213ENST00000560175 SCAMP4Q969E2 229 aa13.17□□□□□ -0.3
SMAD3-213ENST00000560175 AP2M1Q96CW1 435 aa13.17□□□□□ -0.3
SMAD3-213ENST00000560175 SRPK1Q96SB4 655 aaKnown RBP13.17□□□□□ -0.3
SMAD3-213ENST00000560175 MRPL40Q9NQ50 206 aaKnown RBP13.17□□□□□ -0.3
SMAD3-213ENST00000560175 EVA1BQ9NVM1 165 aa13.17□□□□□ -0.3
SMAD3-213ENST00000560175 TRNAU1APQ9NX07 287 aaKnown RBP13.17□□□□□ -0.3
SMAD3-213ENST00000560175 CNOT6Q9ULM6 557 aaKnown RBP13.17□□□□□ -0.3
SMAD3-213ENST00000560175 CACNA1BQ00975 2339 aa13.17□□□□□ -0.3
SMAD3-213ENST00000560175 PRSS38A1L453 326 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 GOLGA6L6A8MZA4 724 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 ARHGAP6O43182 974 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 OPA1O60313 960 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 TJP3O95049 919 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 IVLP07476 585 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 CTSEP14091 401 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 DAB2P98082 770 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 OTUD4Q01804 1114 aaKnown RBP13.16□□□□□ -0.3
SMAD3-213ENST00000560175 DENND2CQ68D51 928 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 AADACL2Q6P093 401 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 PEX26Q7Z412 305 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 C17orf82Q86X59 251 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-213ENST00000560175 GKN2Q86XP6 184 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 LRRC8AQ8IWT6 810 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 KLHDC8BQ8IXV7 354 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 CCDC112Q8NEF3 446 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 OXNAD1Q96HP4 312 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-213ENST00000560175 MRGPRX2Q96LB1 330 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 AGAP2Q99490 1192 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 TMEM168Q9H0V1 697 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 CDH19Q9H159 772 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 ZFYVE1Q9HBF4 777 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 SEPT10Q9P0V9 454 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 FAM153AQ9UHL3 310 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 ST14Q9Y5Y6 855 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 CAPN6Q9Y6Q1 641 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 ACACAQ13085 2346 aa13.16□□□□□ -0.3
SMAD3-213ENST00000560175 ZFHX4Q86UP3 3567 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 UNC13CQ8NB66 2214 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 C1orf232A0A0U1RR37 186 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 MACROD2A1Z1Q3 448 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 TRABD2BA6NFA1 517 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 MYF5P13349 255 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 JUPP14923 745 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 NFKB1P19838 968 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 RBL1P28749 1068 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 CETN2P41208 172 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 GPR1P46091 355 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 RPIAP49247 311 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 DCDC1P59894 354 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 MPP3Q13368 585 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 GALNT3Q14435 633 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 RTP5Q14D33 572 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 NR0B2Q15466 257 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 HES3Q5TGS1 186 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 RAET1GQ6H3X3 334 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 GUSBP11Q6P575 273 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 PID1Q7Z2X4 250 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 RD3Q7Z3Z2 195 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 NRROSQ86YC3 692 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 MARCH9Q86YJ5 346 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 PDCD7Q8N8D1 485 aaKnown RBP13.15□□□□□ -0.3
SMAD3-213ENST00000560175 IFI44Q8TCB0 444 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 CCHCR1Q8TD31 782 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 DTX3LQ8TDB6 740 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 SCG3Q8WXD2 468 aaKnown RBP13.15□□□□□ -0.3
SMAD3-213ENST00000560175 GLMNQ92990 594 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 HAUS1Q96CS2 278 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 HIC2Q96JB3 615 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 GORASP1Q9BQQ3 440 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 RIOK2Q9BVS4 552 aaKnown RBP13.15□□□□□ -0.3
SMAD3-213ENST00000560175 FAM83DQ9H4H8 585 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 CYP4F12Q9HCS2 524 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 CD84Q9UIB8 345 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 CELSR3Q9NYQ7 3312 aa13.15□□□□□ -0.3
SMAD3-213ENST00000560175 ANKRD11Q6UB99 2663 aaPredicted RBP13.15□□□□□ -0.31
SMAD3-213ENST00000560175 APC2O95996 2303 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 FAM149AA5PLN7 773 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 TAF4O00268 1085 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 KRT86O43790 486 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 NOBOXO60393 691 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 ZNF189O75820 626 aaPredicted RBP13.14□□□□□ -0.31
SMAD3-213ENST00000560175 RBP3P10745 1247 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 WNT3AP56704 352 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 TARDBPQ13148 414 aaKnown RBP eCLIP13.14□□□□□ -0.315e-9■■■■■ 30.1
SMAD3-213ENST00000560175 ST3GAL2Q16842 350 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 CCDC157Q569K6 752 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms